Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20frigida_20[genbank_20GCA_5F000815965.1_202015-01-07] 1,539 sequences; 28,651,359 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq109 82.4 1e-10 >seq109 Length=52016 Score = 82.4 bits (90), Expect = 1e-10 Identities = 157/226 (69%), Gaps = 4/226 (2%) Strand=Plus/Plus Query 11630 GCATCAATCTCATCAATGAAGACAATACATGGTTGATT-TTCGCGGGCGATTTCAAAGAG 11688 || || ||||| || ||||||| || || || || ||| || || | | ||||| Sbjct 17680 GCGTCGATCTCGTCGATGAAGATGATGCAGGGAGCGTTCTTCTTGGCCG-TAGCGAAGAG 17738 Query 11689 ATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAGAGCA 11748 ||| ||||| || || || || || || ||||||||||| || | | | ||| | Sbjct 17739 ATCTCGAACTCTGGAGGATCCGACTCCGACGAACATCTCCACGAACTCCGAACCGGAG-A 17797 Query 11749 CTG-GATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCG 11807 | | || ||| || || | |||||| ||| ||||| ||||| |||||||||||| | Sbjct 17798 CGGAGAAGAAGGGCACGCCAGCTTCACCGGCGGTGGCTTTGGCGATGAGGGTCTTTCCGG 17857 Query 11808 TACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC 11853 | || || || | ||| | ||| ||||| ||||||||||| || Sbjct 17858 TTCCGGGAGGTCCAGAGAGGATGGCTCCTCGAGGGATCTTGGCTCC 17903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628019918234400