Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mrakia_20frigida_20[genbank_20GCA_5F000815965.1_202015-01-07]
1,539 sequences; 28,651,359 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq712 118 1e-21
seq622 82.4 9e-11
>seq712
Length=12724
Score = 118 bits (130), Expect = 1e-21
Identities = 157/215 (73%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 94733 CAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT-TGATACAA--AGT 94789
|||| || || |||| | || || ||||||||| | |||||| | | | ||| |||
Sbjct 5943 CAGTCCCCTGCATTCGACGAAAGGCCGATTGGGCTCTCAAGTGGATCTCGTCCAAGGAGT 6002
Query 94790 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 94849
| |||| |||||||||||| |||| || | || ||||| |||||||||||||
Sbjct 6003 CCA---CCTTCGCTGAGCGACTCGTCGCCTTCTCCGCCGTCGAGGGAATCTTCTTCTCTG 6059
Query 94850 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909
| || ||| | || | ||||||||||||||||| || ||||| || || ||||
Sbjct 6060 GATCGTTCGCTTCCATCTTCTGGCTCAAGAAGCGAGGACTAATGCCCGGACTTACGTTCT 6119
Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944
|||||||| | ||||| | ||||||||||| |||
Sbjct 6120 CCAACGAGTTGATCTCGAGGGACGAGGGACTTCAC 6154
>seq622
Length=15186
Score = 82.4 bits (90), Expect = 9e-11
Identities = 81/105 (77%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 169348 CTTCCCACGAAGAGGGAAGACACCGTAGTGATCACGACCAACGACGGAGAGACCCGCGAC 169407
||| || |||||||||||||| ||||||||||| || || |||| | ||| || |||||
Sbjct 6246 CTTTCCTCGAAGAGGGAAGACTCCGTAGTGATCTCGTCCGACGATGTCGAGTCCGGCGAC 6187
Query 169408 TGCGAGAGTCTTCGCCGAGTCACCCTCGGTGACGATGAGCGTACA 169452
||||| | || || || || || ||||||| ||||| || ||
Sbjct 6186 GGCGAGCGCTTTGGCGGAATCTCCTTCGGTGAGAATGAGAGTGCA 6142
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583249579520360
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |