Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20frigida_20[genbank_20GCA_5F000815965.1_202015-01-07] 1,539 sequences; 28,651,359 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq141 84.2 1e-11 >seq141 Length=45857 Score = 84.2 bits (92), Expect = 1e-11 Identities = 168/246 (68%), Gaps = 6/246 (2%) Strand=Plus/Minus Query 23615 AGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACA 23674 |||| |||||||| ||||| ||||| || || ||||| | || || || || |||||| Sbjct 44538 AGATCTTCGTTAAGACCCTTACGGGGAAGACCATCACCTTGGAGGTGGAGTCTTCGGACA 44479 Query 23675 CTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGC 23734 | | || | | || || || ||||| || ||| | || || ||||| |||| Sbjct 44478 CCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCTGATCAGCAGC 44419 Query 23735 GTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCAC--TTTAGGCGATTACAACAT 23792 | | || || || || || || || || || | ||| || ||| || |||||||||| Sbjct 44418 GACTCATCTTCGCTGGAAAGCAGCTCGAGGATGGACGAACCCTTTCGG--ATTACAACAT 44361 Query 23793 ACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGATC--AGCAGTTAAA 23850 || || |||||||| | || || ||| | | | ||||||||| | || || ||| Sbjct 44360 CCAGAAGGAGTCCACCCTTCACTTGGTTCTTCGTCTTCGAGGAGGAGCCAAGAAGAGAAA 44301 Query 23851 GATGAA 23856 || ||| Sbjct 44300 GAAGAA 44295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338003260101812