Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20frigida_20[genbank_20GCA_5F000815965.1_202015-01-07] 1,539 sequences; 28,651,359 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq141 96.9 8e-15 >seq141 Length=45857 Score = 96.9 bits (106), Expect = 8e-15 Identities = 147/206 (71%), Gaps = 5/206 (2%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || ||||| || |||||||||||||| | | |||| ||||| || | Sbjct 44336 CAAG-TGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTTCGTCCATCCTCGA 44394 Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 | ||||| || |||||||| || | |||||| || | | ||| || ||||| || || Sbjct 44395 GCTGCTTT--CCAGCGAAGATGAGTCGCTGCTGATCAGGAGGGATACCCTCCTTGTCCTG 44452 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 || || ||||| | || | | |||| ||| ||| || || | || || || || Sbjct 44453 GATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATGGTCTT 44512 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCT 152100 ||||| || ||||| ||||||| || Sbjct 44513 CCCCGTAAGGGTCTTAACGAAGATCT 44538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153798048456669