Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20frigida_20[genbank_20GCA_5F001600395.1_202016-03-01] 149 sequences; 28,616,317 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq57 87.8 2e-12 >seq57 Length=88419 Score = 87.8 bits (96), Expect = 2e-12 Identities = 188/275 (68%), Gaps = 11/275 (4%) Strand=Plus/Minus Query 145952 TCCTGCTCTCGG---GGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGC 146008 |||| || |||| |||| ||||||||| || || ||| ||||| ||||| | Sbjct 60121 TCCTCCTATCGGTAGGGTTGTTCTTGATCTTCCAGATACAATCCTCCAGCTGATCCACCC 60062 Query 146009 CCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGA 146068 ||| |||| ||| || | | ||||| ||||| || ||||| ||||||||||||| Sbjct 60061 CCTTCCCCTTGTAGTCGGCGTGACAGTCCTCGTACTTCGCTCCGAAATGCCTCCACTGGA 60002 Query 146069 ACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGA 146128 ||||||| || || || |||||||| || | ||| || || | | |||| Sbjct 60001 ACCCGTACACAGGTCCGAGGTCCCCTTCTTCTCGGTGAGAGAGACCTCGAGAGTCAAGGA 59942 Query 146129 AGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTC-GC-GGA--GAGCTCATTG 146184 || | || || || || |||||||||| | || | || || || ||| ||| || | Sbjct 59941 AGGCTCGAGAACCATTCCCGTCCCAGATGTGGATGTCCTTCTGCTGGAGCGAGAGCA-TC 59883 Query 146185 GAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTC 146219 ||| || || ||| ||||||||| || ||||| Sbjct 59882 GAG---GTCGAGCCCGAGATGAACCAAAGGAGCTC 59851 Score = 86.0 bits (94), Expect = 7e-12 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 145690 TCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCG 145749 || ||||||| ||||||||| ||||| |||| | ||||||| || || | Sbjct 60572 TCGACGTGGTCCTTGTAGACGTGAGCGTCTCCCATCTGGAGGATGAACTCGTGAGGGGTG 60513 Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 | | |||| | |||||| ||||| ||| || ||||||||| ||| ||||||||||| Sbjct 60512 GTGTCGGTGACGAGGGCGATCATGTGGGTGAGGAGGGAGTAGGAGGCGATGTTGAAGGGA 60453 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAG 145856 | || || || | || | ||||| ||||||| |||||||||| Sbjct 60452 ATTCCGAGTCCGAGATCGCAGGAGCGTTGGTACATGAGGCAGGAGAG 60406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590075700981960