Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20frigida_20[genbank_20GCA_5F001600395.1_202016-03-01] 149 sequences; 28,616,317 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq34 96.9 3e-15 seq7 89.7 4e-13 >seq34 Length=267493 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || ||| ||||||||| |||||||| || || || | || || Sbjct 242631 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTTCGTCCATCCTCG 242572 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || ||||| ||||| || | ||||| || || ||||| | |||||||||||| Sbjct 242571 AGCTGCTTTCCAGCGAAGATGAGTCGCTGCTGATCAGGAGGGATTCCCTCCTTGTCCTGG 242512 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | ||||| | ||||||||||| ||| || ||||| Sbjct 242511 ATCTTAGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATGGTCTTC 242452 Query 45308 CCCGTCAGAGTCTTCACAAAGAT 45330 ||||| || ||||| || ||||| Sbjct 242451 CCCGTAAGGGTCTTAACGAAGAT 242429 >seq7 Length=945956 Score = 89.7 bits (98), Expect = 4e-13 Identities = 81/100 (81%), Gaps = 4/100 (4%) Strand=Plus/Plus Query 45147 CCTTCTGAATGTTGTAGTCGTTCA--GTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||| |||||||||||| || ||| ||| |||| || || || ||||||||||| Sbjct 574758 CCTTCTGGATGTTGTAGTCGGACAACGTT--CGACCGTCCTCGAGCTGCTTTCCGGCGAA 574815 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 ||||| ||||| ||||| ||||| | ||||||||| ||| Sbjct 574816 GATCAATCGCTGCTGGTCAGGAGGGATACCCTCCTTATCC 574855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395074482568129