Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20frigida_20[genbank_20GCA_5F001600395.1_202016-03-01] 149 sequences; 28,616,317 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq41 123 3e-23 >seq41 Length=199935 Score = 123 bits (136), Expect = 3e-23 Identities = 148/199 (74%), Gaps = 3/199 (2%) Strand=Plus/Plus Query 33589 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCA 33648 ||||| ||| |||||||| || || || || ||||| || ||||| |||||||||| Sbjct 183118 AATCGGTGTGAAGACCCTCATCCCTCGAGATCAACTCGTTGGAGAACGTAAGTCCGGGCA 183177 Query 33649 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTT 33708 | || || ||||| || ||||| || |||||||| || |||||||| ||||||||||| | Sbjct 183178 TGAGTCCTCGCTTCTTGAGCCAGAAGATGGAAGCAAACGATCCGGAGAAGAAGATTCCCT 183237 Query 33709 CTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG-CGCTGTC--ATGTATCCACT 33765 | || ||||| || || | |||| ||| | | || | | || | ||||||| Sbjct 183238 CGACGGCAGCGAAAGCGACGAGTCGCTCAGCGAAGGAGGACTCCTTCGAAGAGATCCACT 183297 Query 33766 TTTGAGCCCAATCGGCCTT 33784 | |||||||||||||||| Sbjct 183298 TGAGAGCCCAATCGGCCTT 183316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629816426964720