Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20frigida_20[genbank_20GCA_5F001600395.1_202016-03-01] 149 sequences; 28,616,317 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq28 80.6 4e-11 seq6 80.6 4e-11 >seq28 Length=358189 Score = 80.6 bits (88), Expect = 4e-11 Identities = 82/107 (77%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 16469 CAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTC 16528 || || ||||||||||| || ||||| || |||| || | || ||||||||||| || Sbjct 140977 CAGGGTATCACCAAGCCCGCGATCCGACGATTGGCGCGAAGAGGAGGAGTCAAGCGAATC 141036 Query 16529 TCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCT 16575 |||||| || |||| || |||| || | |||| | ||| ||||||| Sbjct 141037 TCTGGACTGATCTACGAGGAGACCCGAGGTGTTCTCAAGCTCTTCCT 141083 >seq6 Length=1113472 Score = 80.6 bits (88), Expect = 4e-11 Identities = 82/107 (77%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 16469 CAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTC 16528 || || ||||||||||| || ||||| || |||| || | || ||||||||||| || Sbjct 362915 CAGGGTATCACCAAGCCCGCGATCCGACGATTGGCGCGAAGAGGAGGAGTCAAGCGAATC 362856 Query 16529 TCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCT 16575 |||||| || |||| || |||| || | |||| | ||| ||||||| Sbjct 362855 TCTGGACTGATCTACGAGGAGACCCGAGGTGTTCTCAAGCTCTTCCT 362809 Score = 80.6 bits (88), Expect = 4e-11 Identities = 82/107 (77%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 16469 CAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTC 16528 || || ||||||||||| || ||||| || |||| || | || ||||||||||| || Sbjct 544584 CAGGGTATCACCAAGCCCGCGATCCGACGATTGGCGCGAAGAGGAGGAGTCAAGCGAATC 544643 Query 16529 TCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCT 16575 |||||| || |||| || |||| || | |||| | ||| ||||||| Sbjct 544644 TCTGGACTGATCTACGAGGAGACCCGGGGTGTTCTCAAGCTCTTCCT 544690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075063768257