Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20frigida_20[genbank_20GCA_5F001600395.1_202016-03-01] 149 sequences; 28,616,317 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq41 84.2 6e-11 >seq41 Length=199935 Score = 84.2 bits (92), Expect = 6e-11 Identities = 140/202 (69%), Gaps = 3/202 (1%) Strand=Plus/Minus Query 22441 AAGGCAGATTGGGCGCTGAAATGGATGAAC---AATGAACGTTCATTCGCGGAACGTCTT 22497 ||||| |||||||| || || ||||| || || || ||||| || || || Sbjct 183316 AAGGCCGATTGGGCTCTCAAGTGGATCTCTTCGAAGGAGTCCTCCTTCGCTGAGCGACTC 183257 Query 22498 ATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGG 22557 | || || |||| || || || || ||||| || ||| | ||| | | ||||| ||| Sbjct 183256 GTCGCTTTCGCTGCCGTCGAGGGAATCTTCTTCTCCGGATCGTTTGCTTCCATCTTCTGG 183197 Query 22558 CTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGAT 22617 || || || || | | | ||||| || || ||||| || || ||||| || | ||| Sbjct 183196 CTCAAGAAGCGAGGACTCATGCCCGGACTTACGTTCTCCAACGAGTTGATCTCGAGGGAT 183137 Query 22618 GAGGGTCTTCATACCGATTTTG 22639 ||||||||||| ||||||| || Sbjct 183136 GAGGGTCTTCACACCGATTGTG 183115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303351111816518