Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20frigida_20[genbank_20GCA_5F001600395.1_202016-03-01] 149 sequences; 28,616,317 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq41 114 2e-20 >seq41 Length=199935 Score = 114 bits (126), Expect = 2e-20 Identities = 146/199 (73%), Gaps = 3/199 (2%) Strand=Plus/Plus Query 32668 AATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 32727 ||||| ||| |||||||| || || || || |||||||| ||||| |||||||||| Sbjct 183118 AATCGGTGTGAAGACCCTCATCCCTCGAGATCAACTCGTTGGAGAACGTAAGTCCGGGCA 183177 Query 32728 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTT 32787 | || || ||||| || ||||| || ||||| ||||| ||||| || ||||| ||||| | Sbjct 183178 TGAGTCCTCGCTTCTTGAGCCAGAAGATGGAAGCAAACGATCCGGAGAAGAAGATTCCCT 183237 Query 32788 CTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG-CGCTGTC--ATGTATCCACT 32844 | || || || || || | |||| ||| | | || | | || | ||||||| Sbjct 183238 CGACGGCAGCGAAAGCGACGAGTCGCTCAGCGAAGGAGGACTCCTTCGAAGAGATCCACT 183297 Query 32845 TTTGAGCCCAATCGGCCTT 32863 | |||||||||||||||| Sbjct 183298 TGAGAGCCCAATCGGCCTT 183316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633630819860400