Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20frigida_20[genbank_20GCA_5F001600395.1_202016-03-01] 149 sequences; 28,616,317 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq7 96.9 3e-15 seq34 87.8 2e-12 seq15 84.2 2e-11 >seq7 Length=945956 Score = 96.9 bits (106), Expect = 3e-15 Identities = 121/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || |||| || ||||| || || |||| || | || | ||||| Sbjct 574534 ACCGGAAAGACCATCACCCTGGAAGTCGAGTCCTCCGACACGATCGATAACGTCAAAGCC 574475 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || ||||| ||||||||||| || || || |||||||| || || || || ||||| || Sbjct 574474 AAGATTCAGGACAAGGAGGGAATCCCTCCTGATCAACAGCGACTCATCTTCGCCGGGAAG 574415 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAG 22408 ||| | |||||| || || |||| || ||||||||||| |||| Sbjct 574414 CAGCTTGAGGATGGTCGAACTCTCTCGGACTACAACATTCAGAAAG 574369 Score = 87.8 bits (96), Expect = 2e-12 Identities = 119/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || |||| || || || || || |||| ||| | ||| | |||| Sbjct 575314 ACCGGAAAGACCATCACCCTCGAGGTCGAGTCCTCCGACACCATCGACAACGTCAAGGCT 575255 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || |||||||||||||| || || || ||||| ||||| || || || || || || Sbjct 575254 AAGATCCAAGACAAGGAGGGAATCCCTCCTGATCAGCAACGACTCATCTTCGCTGGAAAG 575195 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAG 22408 || | |||||| || || | |||||||||||||| || |||| Sbjct 575194 CAACTTGAGGATGGACGAACTCTTTCCGATTACAACATCCAGAAAG 575149 >seq34 Length=267493 Score = 87.8 bits (96), Expect = 2e-12 Identities = 152/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 22225 ATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACC 22284 || || ||||| || | || || || || |||| | || ||||| | | || ||| Sbjct 242429 ATCTTCGTTAAGACCCTTACGGGGAAGACCATCACCTTGGAGGTGGAGTCTTCGGACACC 242488 Query 22285 GTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGT 22344 | ||| | |||| || || || ||||||||||| || || || ||||| || || Sbjct 242489 ATCGACAACGTCAAGGCTAAGATCCAGGACAAGGAGGGAATCCCTCCTGATCAGCAGCGA 242548 Query 22345 CTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAA 22404 || || || || || || ||| | |||||| || ||| | || ||||||||||| || Sbjct 242549 CTCATCTTCGCTGGAAAGCAGCTCGAGGATGGACGAACCCTTTCGGATTACAACATCCAG 242608 Query 22405 AAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || |||||| | || || ||| | || | || ||||| Sbjct 242609 AAGGAGTCCACCCTTCACTTGGTTCTTCGTCTTCGAGGAGG 242649 >seq15 Length=705085 Score = 84.2 bits (92), Expect = 2e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 22306 ATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAG 22365 || ||||||||||||||||| || || || || || || || || || ||||| || ||| Sbjct 440387 ATCCAAGACAAGGAGGGTATCCCCCCTGACCAGCAGCGACTCATCTTCGCCGGAAAGCAG 440328 Query 22366 TTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTA 22425 | ||||| || ||| | || ||||||||||| || || || || ||| | || || Sbjct 440327 CTCGAGGACGGACGAACCCTTTCGGATTACAACATCCAGAAGGAGTCGACCCTTCACTTG 440268 Query 22426 GTTTTGCGATTGCGCGGAGGT 22446 || | | ||||| |||||| Sbjct 440267 GTCCTCAGGTTGCGAGGAGGT 440247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727237800185