Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20frigida_20[genbank_20GCA_5F001600395.1_202016-03-01] 149 sequences; 28,616,317 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq15 93.3 4e-14 seq7 89.7 5e-13 >seq15 Length=705085 Score = 93.3 bits (102), Expect = 4e-14 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || ||||| || || || | |||| ||||| || || || ||||||||||| | Sbjct 440247 ACCTCCTCGCAACCTGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGA 440306 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| || |||| || |||||||| ||||| | ||||| ||||||||||| || || Sbjct 440307 AAGGGTTCGTCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGTCGCTGCTGGTCAGGGGG 440366 Query 64336 AATTCCTTCTTTTTCTTGTAT 64356 || || || || ||||| || Sbjct 440367 GATACCCTCCTTGTCTTGGAT 440387 >seq7 Length=945956 Score = 89.7 bits (98), Expect = 5e-13 Identities = 123/170 (72%), Gaps = 4/170 (2%) Strand=Plus/Plus Query 64256 TTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATG 64315 || || ||||||||||| | || || || |||| || |||||||| ||||| ||||| Sbjct 573969 TTCTGGATGTTGTAATCAGAGAGTGTTCGACCGTCCTCGAGCTGCTTTCCGGCGAAAATG 574028 Query 64316 AGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCC 64375 || ||||||||||||||||| ||||| || || || || || || ||| || || Sbjct 574029 AGTCGCTGCTGGTCGGGAGGGATTCCCTCCTTATCCTGGATCTTCGCCTTGACGTTGTCG 574088 Query 64376 ACTGTATCACCGGCG--TCCACTTCTACAGTTACGGTCTTGCCGGTCAAA 64423 | || | ||| || || || || | || | |||||| ||||||||| Sbjct 574089 ATGGTGT--CCGACGATTCGACCTCGAGCGTGATGGTCTTTCCGGTCAAA 574136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499643869411560