Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20frigida_20[genbank_20GCA_5F001600395.1_202016-03-01] 149 sequences; 28,616,317 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq23 104 3e-17 seq29 91.5 2e-13 >seq23 Length=420069 Score = 104 bits (114), Expect = 3e-17 Identities = 183/267 (69%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||| || || |||||||| ||||| || ||||| || ||||| | |||| || Sbjct 336883 ATCGAAATCCTCTCCTCCCAAGTGGGTATCTCCAGCGGTGGCCTTGACGGCGAAGACTCC 336824 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 || ||| | | || ||||| || || || || || || || || ||||| || Sbjct 336823 ACCGGTGATGGAGAGAAGGGAGACATCGAAGGTTCCTCCTCCGAGATCGAAGATGAGGAC 336764 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 |||| | || || | | |||| ||||||||||| ||||| || || || || || || Sbjct 336763 GTTCTTCTCCTCCTTGGTCTTCTGGTCGAGACCGTAGGCGATGGCGGCGGCGGTAGGCTC 336704 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || || || || || || || || || || | || || || || || | || Sbjct 336703 GTTGATGATTCGGAGGACGTCAAGTCCGGCGATGAGACCAGCGTCCTTGGTAGCGAGACG 336644 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGAC 7722 || || ||||| |||||||| ||||| Sbjct 336643 CTGGGAGTCGTTGAAGTAGGCGGGGAC 336617 >seq29 Length=335673 Score = 91.5 bits (100), Expect = 2e-13 Identities = 143/204 (70%), Gaps = 3/204 (1%) Strand=Plus/Minus Query 7873 GGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTT 7932 || ||| ||||| | | ||| | ||||| ||| ||||||| |||| ||||| Sbjct 176120 GGAGATGACCTTGAAAGGCCAGTGCTTCATGTCGGACTGGACCTCGGCGTCCTCGAACTT 176061 Query 7933 TCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTT 7992 |||||||| | ||||| || || || | | ||| | ||||||||||| ||||| Sbjct 176060 CCTTCCGATCAATCGCTTAGCGTCGAAGATCGAGTTGGTAGGGTTCATGGCGACCTGGTT 176001 Query 7993 CTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGT 8052 ||| |||||||| ||||| || || || | || || || || ||||| || || || Sbjct 176000 CTTGGCCGCGTCTCCGATGAGTCGCTC---AGAGTCGGTGAAGGCAACGTAGGAAGGAGT 175944 Query 8053 CGTTCGATTCCCTTGGTCGTTCGC 8076 ||||| || || |||||||| || Sbjct 175943 GGTTCGGTTTCCCTGGTCGTTGGC 175920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635131617065160