Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20frigida_20[genbank_20GCA_5F001600395.1_202016-03-01] 149 sequences; 28,616,317 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq41 120 4e-22 >seq41 Length=199935 Score = 120 bits (132), Expect = 4e-22 Identities = 156/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 102109 CAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGC 102168 |||| || || |||| | || || ||||||||| | |||||| | | | ||| | Sbjct 183336 CAGTCCCCTGCATTCGACGAAAGGCCGATTGGGCTCTCAAGTGGATCTCTTCGAAGGAGT 183277 Query 102169 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 102228 ||||| |||||||||||| |||| || || || ||||| ||||||||||| || | Sbjct 183276 CCTCCTTCGCTGAGCGACTCGTCGCTTTCGCTGCCGTCGAGGGAATCTTCTTCTCCGGAT 183217 Query 102229 CCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCC 102287 | || ||| | || | ||||||||||||||||| |||||||| || || |||||| Sbjct 183216 CGTT-TGCTTCCATCTTCTGGCTCAAGAAGCGAGGACTCATGCCCGGACTTACGTTCTCC 183158 Query 102288 AACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 |||||| | ||||| | || ||||| || ||| Sbjct 183157 AACGAGTTGATCTCGAGGGATGAGGGTCTTCAC 183125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741243867280