Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20frigida_20[genbank_20GCA_5F001600395.1_202016-03-01] 149 sequences; 28,616,317 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq41 125 8e-24 seq103 82.4 9e-11 >seq41 Length=199935 Score = 125 bits (138), Expect = 8e-24 Identities = 156/211 (74%), Gaps = 7/211 (3%) Strand=Plus/Plus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 ||||| || ||||||| ||||| | ||| || ||| |||||| |||||||||||| Sbjct 183126 TGAAGACCCTCATCCCTCGAGATCAACTCGTTGGAGAACGTAAGTCCGGGCATGAGTCCT 183185 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 | ||||| ||||| ||||||| | ||| ||| || |||||||| ||||| || Sbjct 183186 CGCTTCTTGAGCCAGAAGATGGAAGCAAACGATCCGGAGAAGAAGATTCCCTCGACGGCA 183245 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGACTTGTCGAA-----CCACTTGAGAG 119682 |||||||||| || |||||||| |||| || | | ||||| ||||||||||| Sbjct 183246 GCGAAAGCGACGAGTCGCTCAGC-GAAGGAGGACTCCT-TCGAAGAGATCCACTTGAGAG 183303 Query 119683 CCCAGTTGGCCTTACGCTCTATGCAGGGGAC 119713 |||| | |||||| || ||||||||||| Sbjct 183304 CCCAATCGGCCTTTCGTCGAATGCAGGGGAC 183334 >seq103 Length=19557 Score = 82.4 bits (90), Expect = 9e-11 Identities = 61/71 (86%), Gaps = 3/71 (4%) Strand=Plus/Minus Query 136706 CACCGTT---CTTATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGG 136762 ||||||| | | |||||||| |||||||||||||||||| |||||||||||||| || Sbjct 1954 CACCGTTGATCGTTTAGCTCAGCTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCTTGG 1895 Query 136763 GTTCGAGCCCC 136773 |||||| |||| Sbjct 1894 GTTCGATCCCC 1884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588974903032200