Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20frigida_20[genbank_20GCA_5F001600395.1_202016-03-01] 149 sequences; 28,616,317 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq41 113 8e-20 seq23 104 4e-17 >seq41 Length=199935 Score = 113 bits (124), Expect = 8e-20 Identities = 120/153 (78%), Gaps = 4/153 (3%) Strand=Plus/Minus Query 25876 GAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCC 25935 ||||| || || || || ||||| || ||||| ||||| ||| ||| |||||||| || Sbjct 183265 GAGCGACTCGTCGCTTTCGCTGCCGTCGAGGGAATCTTCTTCTCCGGATCGTTTGCTTCC 183206 Query 25936 ATCTTCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTAC-TTTTCCAACGAGCTCA 25993 ||||||||||||||| || | |||| ||||||||| || ||| || ||||||||| | | Sbjct 183205 ATCTTCTGGCTCAAGAAG-CGAGGACTCATGCCCGGACT-TACGTTCTCCAACGAGTTGA 183148 Query 25994 TCAGCAGGGACGAGGGTCTCCACAGAGATTTTG 26026 || ||||| |||||||| |||| |||| || Sbjct 183147 TCTCGAGGGATGAGGGTCTTCACACCGATTGTG 183115 >seq23 Length=420069 Score = 104 bits (114), Expect = 4e-17 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 221420 AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAA 221479 || || |||||||||||||| || |||||| ||||||| ||||||||||||| Sbjct 227245 AGAGCGGCGTGGTAGATGGTTTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCGGGTCCG 227304 Query 221480 GTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATG 221539 |||||||| || || ||| ||| ||||||| ||||| || ||||||| |||||| Sbjct 227305 TCAAAGGGCATTCGAAGGATCATGAAGGCGTCGGCGAGTCCTTGCACTCCGACTCCGATG 227364 Query 221540 GGCCTGTGTCTCCTGTTGGA 221559 || | ||||| | ||||||| Sbjct 227365 GGTCGGTGTCGCATGTTGGA 227384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928843070026560