Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20frigida_20[genbank_20GCA_5F001600395.1_202016-03-01] 149 sequences; 28,616,317 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq15 89.7 5e-13 seq7 87.8 2e-12 >seq15 Length=705085 Score = 89.7 bits (98), Expect = 5e-13 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 24789 AGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAAC 24848 ||||||||||||| || || || || || || || || || | ||||| ||||| || | Sbjct 440389 AGATCCAAGACAAGGAGGGTATCCCCCCTGACCAGCAGCGACTCATCTTCGCCGGAAAGC 440330 Query 24849 AGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACT 24908 |||| ||||| ||| | | || ||||| ||||| || ||||| ||||| || |||| Sbjct 440329 AGCTCGAGGACGGACGAACCCTTTCGGATTACAACATCCAGAAGGAGTCGACCCTTCACT 440270 Query 24909 TGGTGTTGCGATTGCGCGGAGG 24930 |||| | | ||||| ||||| Sbjct 440269 TGGTCCTCAGGTTGCGAGGAGG 440248 >seq7 Length=945956 Score = 87.8 bits (96), Expect = 2e-12 Identities = 122/170 (72%), Gaps = 1/170 (1%) Strand=Plus/Minus Query 24725 CTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAA 24784 || ||||| || || || || ||||| || || || ||||||| | || | || || Sbjct 575317 CTCACCGGAAAGACCATCACCCTCGAGGTCGAGTCCTCCGACACCATCGACAACGTCAAG 575258 Query 24785 CAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGG 24844 |||||||||||||| || ||||| ||||| ||||| ||||| | ||||| || || Sbjct 575257 GCTAAGATCCAAGACAAGGAGGGAATCCCTCCTGATCAGCAACGACTCATCTTCGCTGGA 575198 Query 24845 AAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCA-AAAGG 24893 || || || |||||| ||| | || ||||| ||||| || ||||| Sbjct 575197 AAGCAACTTGAGGATGGACGAACTCTTTCCGATTACAACATCCAGAAAGG 575148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449896762065720