Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20frigida_20[genbank_20GCA_5F001600395.1_202016-03-01] 149 sequences; 28,616,317 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq7 109 6e-19 seq34 89.7 5e-13 >seq7 Length=945956 Score = 109 bits (120), Expect = 6e-19 Identities = 126/167 (75%), Gaps = 2/167 (1%) Strand=Plus/Plus Query 134524 CCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAA 134582 |||| || ||||||||||| | |||| || || ||| |||||||| || || || || Sbjct 574758 CCTTCTGGATGTTGTAGTCGGACAAC-GTTCGACCGTCCTCGAGCTGCTTTCCGGCGAAG 574816 Query 134583 ATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCG 134642 ||||| |||||||| || || || || || || || || || || || |||||| | Sbjct 574817 ATCAATCGCTGCTGGTCAGGAGGGATACCCTCCTTATCCTGGATCTTGGCTTTGACGTTG 574876 Query 134643 TCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 || | |||||||||||||| || |||||||| ||||| || ||||| Sbjct 574877 TCGATCGTGTCGGACGATTCAACCTCGAGAGTGATGGTCTTTCCGGT 574923 >seq34 Length=267493 Score = 89.7 bits (98), Expect = 5e-13 Identities = 153/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 134486 TCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCC 134545 |||||||| || || | || | ||| || ||||| ||||| || |||||||| || Sbjct 242650 TCCTCCTCGAAGACGAAGAACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGA 242591 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || ||| | || |||||||| || || || || || | ||||||||||| || || Sbjct 242590 AAGGGTTCGTCCATCCTCGAGCTGCTTTCCAGCGAAGATGAGTCGCTGCTGATCAGGAGG 242531 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || || || || || || || || ||||| ||| | ||||| || || ||||| Sbjct 242530 GATTCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCAC 242471 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAAT 134707 || | || ||||| || || || | || |||||||| || Sbjct 242470 CTCCAAGGTGATGGTCTTCCCCGTAAGGGTCTTAACGAAGAT 242429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505397458695480