Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mrakia_20frigida_20[genbank_20GCA_5F001600395.1_202016-03-01]
149 sequences; 28,616,317 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq34 82.4 7e-11
seq7 82.4 7e-11
>seq34
Length=267493
Score = 82.4 bits (90), Expect = 7e-11
Identities = 152/223 (68%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 26992 AGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACT 27051
|||| || || || || || || || ||| | || || | || ||||| | || |||
Sbjct 242427 AGATCTTCGTTAAGACCCTTACGGGGAAGACCATCACCTTGGAGGTGGAGTCTTCGGACA 242486
Query 27052 CGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGC 27111
| || || | ||||| || || || ||||| || || || || || ||||| ||||
Sbjct 242487 CCATCGACAACGTCAAGGCTAAGATCCAGGACAAGGAGGGAATCCCTCCTGATCAGCAGC 242546
Query 27112 GTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTC 27171
| | || | ||| || || || | || || | ||| |||| ||||||||||| |
Sbjct 242547 GACTCATCTTCGCTGGAAAGCAGCTCGAGGATGGACGAACCCTTTCGGATTACAACATCC 242606
Query 27172 AAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
| |||||||| ||| | || |||||| | ||| | || || ||
Sbjct 242607 AGAAGGAGTCCACCCTTCACTTGGTTCTTCGTCTTCGAGGAGG 242649
>seq7
Length=945956
Score = 82.4 bits (90), Expect = 7e-11
Identities = 121/170 (71%), Gaps = 1/170 (1%)
Strand=Plus/Minus
Query 27009 CTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAA 27068
|| ||||| ||| | || || || ||||| || | |||||| |||| || | ||||||
Sbjct 574537 CTTACCGGAAAGACCATCACCCTGGAAGTCGAGTCCTCCGACACGATCGATAACGTCAAA 574478
Query 27069 CAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGC 27128
|| ||||| ||||| || || || || || ||||||||||| | || | ||||||
Sbjct 574477 GCCAAGATTCAGGACAAGGAGGGAATCCCTCCTGATCAACAGCGACTCATCTTCGCCGGG 574418
Query 27129 AAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCA-AAAGG 27177
|| || | || || || || | || || ||||||||||| |||||
Sbjct 574417 AAGCAGCTTGAGGATGGTCGAACTCTCTCGGACTACAACATTCAGAAAGG 574368
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434917589964480
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |