Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20frigida_20[genbank_20GCA_5F001600395.1_202016-03-01] 149 sequences; 28,616,317 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq34 102 2e-16 seq15 86.0 1e-11 >seq34 Length=267493 Score = 102 bits (112), Expect = 2e-16 Identities = 148/206 (72%), Gaps = 5/206 (2%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || ||||| || |||||||||||||| | | |||| ||||| || | Sbjct 242629 CAAG-TGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTTCGTCCATCCTCGA 242571 Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 | ||||| || |||||||| || | |||||| || | | |||||| ||||| || || Sbjct 242570 GCTGCTTT--CCAGCGAAGATGAGTCGCTGCTGATCAGGAGGGATTCCCTCCTTGTCCTG 242513 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 || || ||||| | || | | |||| ||| ||| || || | || || || || Sbjct 242512 GATCTTAGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATGGTCTT 242453 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCT 152100 ||||| || ||||| ||||||| || Sbjct 242452 CCCCGTAAGGGTCTTAACGAAGATCT 242427 >seq15 Length=705085 Score = 86.0 bits (94), Expect = 1e-11 Identities = 98/130 (75%), Gaps = 4/130 (3%) Strand=Plus/Plus Query 151890 CTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCA 151949 |||||||| | ||||| || ||||| || |||||||||||||| | | |||| || Sbjct 440260 CTGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGAAAGGGTTCGTCCG 440319 Query 151950 TCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCT 152007 || || || ||||| ||||||||||| || | ||||||||| | | ||| || |||| Sbjct 440320 TCCTCGAGCTGCTTT--CCGGCGAAGATGAGTCGCTGCTGGTCAGGGGGGATACCCTCCT 440377 Query 152008 TTTCTTGAAT 152017 | ||||| || Sbjct 440378 TGTCTTGGAT 440387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153818597283979