Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20psychrophila_20[genbank_20GCA_5F001889225.1_202016-12-05] 1,975 sequences; 27,770,102 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq1214 91.5 2e-13 >seq1214 Length=29191 Score = 91.5 bits (100), Expect = 2e-13 Identities = 204/303 (67%), Gaps = 14/303 (5%) Strand=Plus/Minus Query 145924 GCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGG---GGTTCCTCTTGATCTCC 145980 || |||||||| || | | | || ||||||| |||| | || ||||||||| | Sbjct 3522 GCAGGGTTCCAAGCACTCAAAATGATCCTCCTG---TCGGTAGGATTGTTCTTGATCTTC 3466 Query 145981 CCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACG 146040 | || |||| ||||| || || |||| || | ||| || | | ||||| || Sbjct 3465 CAGATACAGTCCTCCAGCTGATCTACCCCCTTCCTCTTGTAGTCGGCGTGACAGTCCTCG 3406 Query 146041 TACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCC 146100 ||| || ||||| ||||||||||||||||||||||| || || || || || ||| Sbjct 3405 TACTTCGCTCCGAAATGCCTCCACTGGAACCCGTAGACAGGTCCGAGATCTCCCTCCTCT 3346 Query 146101 CTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTG 146160 | ||| || || | |||||||| | || || ||||| |||||||||| | | Sbjct 3345 CGGTGAGAAAGACCTCGAGAGTCGAGGAAGGCTCGAGAACCGTTCCCGTCCCAGATGTGG 3286 Query 146161 ACGCCCCTC----GCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAG 146216 | | || || || | ||| || | ||| || || || |||||||||||| || Sbjct 3285 ATGTCCTTCTGCTGCAGCGAGAGCA-TCGAG---GTCGAGCCGGAGATGAACCAGAGGAG 3230 Query 146217 CTC 146219 ||| Sbjct 3229 CTC 3227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590062232479000