Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20psychrophila_20[genbank_20GCA_5F001889225.1_202016-12-05] 1,975 sequences; 27,770,102 total letters Query= NC_003521.1 Length=241087 Score E Sequences producing significant alignments: (Bits) Value seq1866 86.0 1e-11 >seq1866 Length=53872 Score = 86.0 bits (94), Expect = 1e-11 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 77365 AGGGTGGAGTAGCACAGGTTGTGGGCCATGATGATGGAGGGGTAGAGGCTGGCGAAGTCG 77424 || |||| |||||| |||||||||||||| |||||||| ||||||||| ||||| ||| Sbjct 19211 AGAGTGGTGTAGCAGAGGTTGTGGGCCATCATGATGGAAGGGTAGAGGGAAGCGAAATCG 19152 Query 77425 AAGACCGCCACGGGGTCGTTGTAGTAGCCCACCACGGGCTCGAAGACGGTGGCACCCTGG 77484 | || | ||| ||| |||||| || | |||||||| |||||| || || | | Sbjct 19151 AGAGTGGCGATGGGAACGTCGTAGTATCCTCGAATGGGCTCGATGACGGTAGCTCCTTCG 19092 Query 77485 TA 77486 || Sbjct 19091 TA 19090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 771331357287000