Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20psychrophila_20[genbank_20GCA_5F001889225.1_202016-12-05] 1,975 sequences; 27,770,102 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq57 123 4e-23 >seq57 Length=51515 Score = 123 bits (136), Expect = 4e-23 Identities = 147/199 (74%), Gaps = 3/199 (2%) Strand=Plus/Plus Query 49967 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 50026 ||||| ||| || |||||||| || || | |||||||| ||||| |||||||||| Sbjct 1239 AATCGGTGTGAAGTCCCTCGTCCCTCGAGATCAACTCGTTGGAGAACGTAAGTCCGGGCA 1298 Query 50027 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTT 50086 |||| || ||||| || ||||| || ||||| || || || ||||| ||||||||||| | Sbjct 1299 TTAGTCCTCGCTTCTTGAGCCAGAAGATGGAAGCGAACGATCCAGAGAAGAAGATTCCCT 1358 Query 50087 CTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATGTATCCACT 50143 | || |||| ||||| || |||| ||| | | ||| | || ||||||| Sbjct 1359 CGACGGCGGAGAAGGCGACGAGTCGCTCAGCGAAGGTGGACTCCTTGGACGAGATCCACT 1418 Query 50144 TTTGAGCCCAATCGGCCTT 50162 | |||||||||||||||| Sbjct 1419 TGAGAGCCCAATCGGCCTT 1437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718251067739000