Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20psychrophila_20[genbank_20GCA_5F001889225.1_202016-12-05] 1,975 sequences; 27,770,102 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq57 98.7 2e-15 >seq57 Length=51515 Score = 98.7 bits (108), Expect = 2e-15 Identities = 117/157 (75%), Gaps = 4/157 (3%) Strand=Plus/Minus Query 243571 ATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCG 243630 ||||||| || |||||| | ||||||||||| ||||| ||||| || | || || || Sbjct 918 ATGAACTGTGCTCTCATGTGCCAGTACATCGAGTTCGTCGCCGATCGACTCCTCGTCTCG 859 Query 243631 CTTGGTTATGAGAA--AGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTT 243688 || || | ||||| | || | || | | ||||||| | ||| |||||| | || | Sbjct 858 CTCGGAAACGAGAAGCACTGGGGATCTTCCA--ACCCCTTCGACTTCATGGAGATGATCT 801 Query 243689 CGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGT 243725 ||||||| |||||| | ||||||||||| ||||| || Sbjct 800 CGCTTCAGGGGAAAGCCAACTTCTTCGAGAAGCGAGT 764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102852091966250