Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20psychrophila_20[genbank_20GCA_5F001889225.1_202016-12-05] 1,975 sequences; 27,770,102 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq24 104 3e-17 >seq24 Length=52002 Score = 104 bits (114), Expect = 3e-17 Identities = 297/452 (66%), Gaps = 11/452 (2%) Strand=Plus/Minus Query 12702 CGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCC 12761 ||||| || || ||||| || | ||| || ||| || | || |||||||| | Sbjct 34513 CGATCGAATCGTCCTGGTCGCATGAGAGCTGGGTCGAGAACGTCCGCTCGGTTCGTTCCA 34454 Query 12762 GCGATGACAACGATGCCCGTCTCGTT--ATC-GAAGCCATCCATCTCAGTCAAGAGTTGA 12818 |||| ||| |||||| | ||||| ||| ||| || |||||||| | ||||||| Sbjct 34453 GCGAGGACGACGATG---GATTCGTTGGATCCGAACCCGTCCATCTCGACGAGGAGTTGA 34397 Query 12819 TTGATGGTTTGTTCACGTTCATCATTCGCGG----GCATACCACCCGCACTGCGTTGCTT 12874 |||| || || || || || ||| | | || |||||| | || ||| Sbjct 34396 TTGAGCGTCGACTCCCGCTCGTCGTTCCCACCGAAGGAT-CCACCCTTCCCACGAGCCTT 34338 Query 12875 ACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGTTGATTTTCACGGGCAACTTC 12934 |||| |||||| || ||||| ||||| | ||| || || || | ||| | Sbjct 34337 TCCGATGGCGTCGATCTCGTCGATGAAGATGATGCAGGGAGCGTTCTTCTTGGCCGTAGC 34278 Query 12935 AAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGC 12994 |||| |||||| ||||| || ||||| || || ||||||||||| || | | | Sbjct 34277 GAAGAGATCTCGAACTCTGGAGGATCCGACTCCGACGAACATCTCCACGAACTCCGAACC 34218 Query 12995 GGAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTT 13054 ||| || |||||| ||| | |||||| ||| ||||| ||||| ||||||||| Sbjct 34217 GGAGACGGAGAAGAAGGGCACGCCAGCTTCACCGGCGGTGGCTTTGGCGATGAGGGTCTT 34158 Query 13055 CCCCGTCCCTGGTTTCCCCGCGAGAAGGGCACCACGTGGGATCCTGGCACCACTTCCAAA 13114 || || || || || | ||| | ||| || || |||||| |||| || | | Sbjct 34157 TCCGGTTCCGGGAGGTCCAGAGAGGATGGCTCCTCGAGGGATCTTGGCTCCGAGGGCGAG 34098 Query 13115 GTAGCGCTCGGGTTGTTTAAGAAAGTCCACGA 13146 | |||| |||||||||| || || | |||| Sbjct 34097 GAAGCGAGCGGGTTGTTTGAGGAACTTGACGA 34066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613492054041000