Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20psychrophila_20[genbank_20GCA_5F001889225.1_202016-12-05] 1,975 sequences; 27,770,102 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1222 120 6e-22 seq57 87.8 3e-12 >seq1222 Length=80008 Score = 120 bits (132), Expect = 6e-22 Identities = 272/401 (68%), Gaps = 15/401 (4%) Strand=Plus/Plus Query 212958 GAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGC 213017 || ||||| ||||||| || ||||||| ||||| ||||| || || || ||| Sbjct 59037 GAGGTGTAAGGCTCGAAGCACTCGTTGAAACCCAGGATCTGACTCGTTGAAGCAGTAGGC 59096 Query 213018 ATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGA-GGCGCCGAAGCTC 213076 || ||||| || ||||| |||||| | |||||| || |||| ||| || | Sbjct 59097 ATAGGAGCGACAAGGAGCGAGTTCCTGATTCCGTGGACGGCGATCTTGGCTTTGAGGGAA 59156 Query 213077 TGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAA 213136 ||||||||||| | | | ||| | || ||||| ||| |||| | Sbjct 59157 -GCCCAGTCCCAAAGGTCGGT-AGGAG--------TAACACCCCACAAGTCGTACTGGA- 59205 Query 213137 GATGCCTTTGCTC-ACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCA 213195 | || | ||| |||||| |||||||| | ||||||| || | || || || | Sbjct 59206 GCTGACCCTGCGAGACGGGGGATCCCTGGTAGGTCGAGTAGGCTCCCTCCTTCTCAGCGA 59265 Query 213196 GCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCT 213255 |||||| || |||| || || |||| ||||||||| || || |||| ||||||||| Sbjct 59266 TCTCGCACGAAGCCTCGAGAGCGGCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCT 59325 Query 213256 TCTTGGCCTCTGGGGACGT-GAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCC 213314 |||||||||| ||| ||| ||||||||| | | ||| |||| || || ||| Sbjct 59326 TCTTGGCCTC-GGGTCCGTCGAAGGGCATTCGAAGGATCATGAAGGCATCGGCGAGTCCC 59384 Query 213315 TGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTT 213355 || || |||| |||||||||| ||||| || ||| || || Sbjct 59385 TGCACTCCGACTCCGATGGGTCGGTGTCGCATGTTGGAGTT 59425 >seq57 Length=51515 Score = 87.8 bits (96), Expect = 3e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 48144 TGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCC 48203 |||| | || ||||||| ||| | | |||||||||| || || ||||| | | Sbjct 1245 TGTGAAGTCCCTCGTCCCTCGAGATCAACTCGTTGGAGAACGTAAGTCCGGGCATTAGTC 1304 Query 48204 CCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTG 48263 | | || ||||||||||| || | ||||| || |||||||||||||| ||||| || | Sbjct 1305 CTCGCTTCTTGAGCCAGAAGATGGAAGCGAACGATCCAGAGAAGAAGATTCCCTCGACGG 1364 Query 48264 CCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCG 48323 | | ||| ||| ||| | ||| |||| | | | |||| |||||||| || | Sbjct 1365 CGGAGAAGGCGACGAGTCGCTCAGCGAAGGTGGACTCCTTGGACGAGATCCACTTGAGAG 1424 Query 48324 CCCAGTCTGCCTT 48336 |||| || ||||| Sbjct 1425 CCCAATCGGCCTT 1437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931509802784000