Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20psychrophila_20[genbank_20GCA_5F001889225.1_202016-12-05] 1,975 sequences; 27,770,102 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1222 113 8e-20 seq57 95.1 2e-14 >seq1222 Length=80008 Score = 113 bits (124), Expect = 8e-20 Identities = 109/140 (78%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 221420 AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAA 221479 || || ||||||||||||||||| |||||| ||||||| ||||||||||||| Sbjct 59283 AGAGCGGCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCGGGTCCG 59342 Query 221480 GTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATG 221539 ||||||||| || || ||| ||| | ||||| |||||||| ||||||| |||||| Sbjct 59343 TCGAAGGGCATTCGAAGGATCATGAAGGCATCGGCGAGTCCCTGCACTCCGACTCCGATG 59402 Query 221540 GGCCTGTGTCTCCTGTTGGA 221559 || | ||||| | ||||||| Sbjct 59403 GGTCGGTGTCGCATGTTGGA 59422 >seq57 Length=51515 Score = 95.1 bits (104), Expect = 2e-14 Identities = 116/153 (76%), Gaps = 4/153 (3%) Strand=Plus/Minus Query 25876 GAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCC 25935 ||||| || || ||||| | || || ||||| ||||| ||| || ||||| || || Sbjct 1386 GAGCGACTCGTCGCCTTCTCCGCCGTCGAGGGAATCTTCTTCTCTGGATCGTTCGCTTCC 1327 Query 25936 ATCTTCTGGCTCAAGCAGAAGGGGACCA-TGCCCGGGCTGTACTTT-TCCAACGAGCTCA 25993 ||||||||||||||| || | |||| | ||||||| || ||| || ||||||||| | | Sbjct 1326 ATCTTCTGGCTCAAGAAGC-GAGGACTAATGCCCGGACT-TACGTTCTCCAACGAGTTGA 1269 Query 25994 TCAGCAGGGACGAGGGTCTCCACAGAGATTTTG 26026 || ||||||||||| || |||| |||| || Sbjct 1268 TCTCGAGGGACGAGGGACTTCACACCGATTGTG 1236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928821869144000