Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20psychrophila_20[genbank_20GCA_5F001889225.1_202016-12-05] 1,975 sequences; 27,770,102 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq24 82.4 9e-11 >seq24 Length=52002 Score = 82.4 bits (90), Expect = 9e-11 Identities = 157/226 (69%), Gaps = 4/226 (2%) Strand=Plus/Plus Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335 || ||||||||||| ||||| ||| | ||| | || || || || |||||||||||| Sbjct 34107 GGAGCCAAGATCCCTCGAGGAGCCATCCTCTCTGGACCTCCCGGAACCGGAAAGACCCTC 34166 Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATC-CAGTGCTCTGCCGCAAA 175394 ||||| ||||| ||| |||||| | || || ||| || | || ||| | | | Sbjct 34167 ATCGCCAAAGCCACCGCCGGTGAAGCTGGCGTGCCCTTCTTCTCCGT-CTCCGGTTCGGA 34225 Query 175395 CTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGC 175454 || ||||||||||| || || || || || || ||||| |||||||| | | || Sbjct 34226 GTTCGTGGAGATGTTCGTCGGAGTCGGATCCTCCAGAGTTCGAGATCTCTTCGCTA-CGG 34284 Query 175455 CCGCGAA-AATCAACCATGTATTGTCTTCATTGATGAGATTGATGC 175499 || ||| || || || || ||||||| || ||||| || || Sbjct 34285 CCAAGAAGAACGCTCCCTGCATCATCTTCATCGACGAGATCGACGC 34330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596554872188000