Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mrakia_20psychrophila_20[genbank_20GCA_5F001889225.1_202016-12-05]
1,975 sequences; 27,770,102 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq601 87.8 3e-12
>seq601
Length=43053
Score = 87.8 bits (96), Expect = 3e-12
Identities = 116/161 (72%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238
|| || |||||||| || |||| | || || | || |||||||| ||||| |||| |
Sbjct 28836 ATGTTGTAGTCGGACAAAGTTCGACCGTCCTCGAGCTGCTTTCCGGCGAAAATCAATCGC 28777
Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298
|| ||||||||||| || || || ||||| || || |||| || | || || ||
Sbjct 28776 TGCTGATCAGGAGGGATACCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATGGTG 28717
Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAG 193339
||||| || ||||| || ||||| || || || || || ||
Sbjct 28716 TCGGACGATTCAACCTCGAGAGTGATGGTCTTTCCGGTAAG 28676
Score = 87.8 bits (96), Expect = 3e-12
Identities = 116/161 (72%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238
|| || |||||||| | |||| ||| || | || |||||||| || || | || |
Sbjct 29228 ATGTTGTAGTCGGAAAGGGTTCGTCCATCTTCGAGCTGCTTTCCGGCGAAGATGAGTCGC 29169
Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298
||||| |||||||| || || || || || || || |||| ||| | || ||||||
Sbjct 29168 TGTTGGTCAGGAGGAATACCCTCCTTGTCCTGAATCTTGGCTTTGACGTTGTCGATAGTA 29109
Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAG 193339
||||||||||| || || ||||| || || || || || ||
Sbjct 29108 TCGGAAGACTCGACCTCGAGAGTGATGGTCTTTCCAGTCAG 29068
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899632189782000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |