Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20psychrophila_20[genbank_20GCA_5F001889225.1_202016-12-05] 1,975 sequences; 27,770,102 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq24 82.4 1e-10 >seq24 Length=52002 Score = 82.4 bits (90), Expect = 1e-10 Identities = 157/226 (69%), Gaps = 4/226 (2%) Strand=Plus/Minus Query 11630 GCATCAATCTCATCAATGAAGACAATACATGGTTGATT-TTCGCGGGCGATTTCAAAGAG 11688 || || ||||| || ||||||| || || || || ||| || || | | ||||| Sbjct 34330 GCGTCGATCTCGTCGATGAAGATGATGCAGGGAGCGTTCTTCTTGGCCG-TAGCGAAGAG 34272 Query 11689 ATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAGAGCA 11748 ||| ||||| || || || || || || ||||||||||| || | | | ||| | Sbjct 34271 ATCTCGAACTCTGGAGGATCCGACTCCGACGAACATCTCCACGAACTCCGAACCGGAG-A 34213 Query 11749 CTG-GATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCG 11807 | | || ||| || || | |||||| ||| ||||| ||||| |||||||||||| | Sbjct 34212 CGGAGAAGAAGGGCACGCCAGCTTCACCGGCGGTGGCTTTGGCGATGAGGGTCTTTCCGG 34153 Query 11808 TACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC 11853 | || || || | ||| | ||| ||||| ||||||||||| || Sbjct 34152 TTCCGGGAGGTCCAGAGAGGATGGCTCCTCGAGGGATCTTGGCTCC 34107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628016495460000