Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mrakia_20psychrophila_20[genbank_20GCA_5F001889225.1_202016-12-05]
1,975 sequences; 27,770,102 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq57 118 1e-21
seq1557 82.4 9e-11
>seq57
Length=51515
Score = 118 bits (130), Expect = 1e-21
Identities = 157/215 (73%), Gaps = 6/215 (3%)
Strand=Plus/Minus
Query 94733 CAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT-TGATACAA--AGT 94789
|||| || || |||| | || || ||||||||| | |||||| | | | ||| |||
Sbjct 1457 CAGTCCCCTGCATTCGACGAAAGGCCGATTGGGCTCTCAAGTGGATCTCGTCCAAGGAGT 1398
Query 94790 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 94849
| |||| |||||||||||| |||| || | || ||||| |||||||||||||
Sbjct 1397 CCA---CCTTCGCTGAGCGACTCGTCGCCTTCTCCGCCGTCGAGGGAATCTTCTTCTCTG 1341
Query 94850 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909
| || ||| | || | ||||||||||||||||| || ||||| || || ||||
Sbjct 1340 GATCGTTCGCTTCCATCTTCTGGCTCAAGAAGCGAGGACTAATGCCCGGACTTACGTTCT 1281
Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944
|||||||| | ||||| | ||||||||||| |||
Sbjct 1280 CCAACGAGTTGATCTCGAGGGACGAGGGACTTCAC 1246
>seq1557
Length=15076
Score = 82.4 bits (90), Expect = 9e-11
Identities = 81/105 (77%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 169348 CTTCCCACGAAGAGGGAAGACACCGTAGTGATCACGACCAACGACGGAGAGACCCGCGAC 169407
||| || |||||||||||||| ||||||||||| || || |||| | ||| || |||||
Sbjct 6248 CTTTCCTCGAAGAGGGAAGACTCCGTAGTGATCTCGTCCGACGATGTCGAGTCCGGCGAC 6189
Query 169408 TGCGAGAGTCTTCGCCGAGTCACCCTCGGTGACGATGAGCGTACA 169452
||||| | || || || || || ||||||| ||||| || ||
Sbjct 6188 GGCGAGCGCTTTGGCGGAATCTCCTTCGGTGAGAATGAGAGTGCA 6144
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583246400749000
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |