Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20psychrophila_20[genbank_20GCA_5F001889225.1_202016-12-05] 1,975 sequences; 27,770,102 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq1214 104 2e-17 >seq1214 Length=29191 Score = 104 bits (114), Expect = 2e-17 Identities = 166/236 (70%), Gaps = 12/236 (5%) Strand=Plus/Minus Query 27385 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATG----AGGTC 27440 |||||||| || | || ||||| | |||||| || |||||| |||| || | Sbjct 3519 GGGTTCCAAGCACTCAAAATGATCCTCCTGTCGGTAGGATTGTTCTTGATCTTCCAGATA 3460 Query 27441 CACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTA 27500 || || | ||||||||| |||||| ||| | |||||| | |||| ||| Sbjct 3459 CA----GTCCTCCAGCTGATCTACCCCCTTCCTCTTGTAGTCGGCGTGACAGTCCTCGTA 3404 Query 27501 CTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT 27560 || ||||||||||||||||| ||||||||||| || ||||| || |||||||| || | Sbjct 3403 CTTCGCTCCGAAATGCCTCCACTGGAACCCGTAGACAGGTCCGAGATCTCCCTCCTCTCG 3344 Query 27561 GTGCTCGAAGCCCCTC--TTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGAT 27614 ||| ||| |||| ||| | ||| ||| |||||||| |||||||||| Sbjct 3343 GTG--AGAAAGACCTCGAGAGTCGAGGAAGGCTCGAGAACCGTTCCCGTCCCAGAT 3290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369498305846225