Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20psychrophila_20[genbank_20GCA_5F001889225.1_202016-12-05] 1,975 sequences; 27,770,102 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq1777 96.9 8e-15 >seq1777 Length=56666 Score = 96.9 bits (106), Expect = 8e-15 Identities = 147/206 (71%), Gaps = 5/206 (2%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || ||||| || |||||||||||||| | | |||| ||||| || | Sbjct 24678 CAAG-TGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTTCGTCCATCCTCGA 24736 Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 | ||||| || |||||||| || | |||||| || | | ||| || ||||| || || Sbjct 24737 GCTGCTTT--CCAGCGAAGATGAGTCGCTGCTGATCAGGAGGGATACCCTCCTTGTCCTG 24794 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 || || ||||| | || | | |||| ||| ||| || || | || || || || Sbjct 24795 GATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATGGTCTT 24854 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCT 152100 ||||| || ||||| ||||||| || Sbjct 24855 CCCCGTAAGGGTCTTAACGAAGATCT 24880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153791602925225