Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycena_20chlorophos_20[genbank_20GCA_5F001612595.1_202016-04-02] 25,660 sequences; 43,602,020 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq20985 120 3e-22 seq11362 107 2e-18 seq4899 84.2 3e-11 >seq20985 Length=2931 Score = 120 bits (132), Expect = 3e-22 Identities = 146/194 (75%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || |||| || |||||||| ||||| || Sbjct 2110 CTCCTTCTGGATGTTGTAGTCGCTCAAGGTACGACCGTCTTCGAGCTGCTTGCCAGCAAA 2169 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || || ||||||||||| | || | || |||||||||| ||| |||||| |||| || Sbjct 2170 AATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCC-TGAATTTTTGCCTTGA-CG 2227 Query 43111 TCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169 | | | | ||||||||| || || || || | |||||||| ||||| || || ||||| Sbjct 2228 TTGTCGATCGTGTCGCTAGACTCGACCTCCAGAGTGATGGTCTTGCCAGTGAGGGTCTTG 2287 Query 43170 ACAAAGATTTGCAT 43183 || ||||| ||||| Sbjct 2288 ACGAAGATCTGCAT 2301 Score = 100 bits (110), Expect = 3e-16 Identities = 112/147 (76%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 42990 CTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCG 43049 ||| | || ||||| ||||| |||| ||||| || |||| || |||||||| |||||| Sbjct 2435 CTCACTTTCTGAATGTTGTAGTCAGAAAGAGTGCGACCGTCCTCGAGCTGCTTTCCAGCG 2494 Query 43050 AATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGC 43109 || || || ||||||||||| | ||| | | |||||||||| ||| || |||| | Sbjct 2495 AAAATAAGGCGCTGCTGGTCCGGCGGGATTCCCTCCTTGTCCTGGATCTTCGCCTTGA-C 2553 Query 43110 GTCG-CCACCGTGTCGCTCGATTCCAC 43135 || | | | ||||||||||||||| || Sbjct 2554 GTTGTCGATCGTGTCGCTCGATTCGAC 2580 Score = 87.8 bits (96), Expect = 2e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| ||||| ||||| |||| || || || | || || |||||||| |||||||| | Sbjct 2813 CCTTCTGAATGTTGTAGTCAGAAAGGGTACGACCATCCTCGAGCTGCTTCCCAGCGAAGA 2872 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTT 43099 |||| ||||||||||||| ||| | | |||||||||| ||| || Sbjct 2873 TGAGACGCTGCTGGTCGGGCGGGATTCCCTCCTTGTCCTGGATCTT 2918 >seq11362 Length=37670 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || | || || || |||| || |||||||| ||||| || Sbjct 29532 CTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAA 29591 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| || ||||| || | ||| | || |||||||||| ||| || || | ||| Sbjct 29592 GATGAGGCGTTGCTGATCCGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCA-CGT 29650 Query 43112 CGCCAC-CGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | || |||||| || || || || | |||||| || ||||| || |||||||| | Sbjct 29651 TGTCAATCGTGTCCGAGGACTCGACCTCCAACGTGATCGTCTTGCCTGTGAGCGTCTTGA 29710 Query 43171 CAAAGATTTGCAT 43183 | ||||||||||| Sbjct 29711 CGAAGATTTGCAT 29723 Score = 93.3 bits (102), Expect = 5e-14 Identities = 139/196 (71%), Gaps = 1/196 (1%) Strand=Plus/Plus Query 42990 CTCTCCTTT-TGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGC 43048 ||| ||||| || || |||||||| | || || || | || || |||||||| ||||| Sbjct 30409 CTCACCTTTCTGGATGTTGTAATCCGAGAGGGTGCGACCATCTTCAAGCTGCTTGCCAGC 30468 Query 43049 GAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAG 43108 ||| ||||| ||||| ||||| | ||| | | ||||||||| ||| || |||| Sbjct 30469 GAAGATGAGGCGCTGTTGGTCAGGCGGGATCCCCTCCTTGTCTTGGATCTTGGCCTTGAC 30528 Query 43109 CGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | | ||||| || || || || | |||||||| ||||| || | ||||| Sbjct 30529 ATTGTCGATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCAGTCAAGGTCTT 30588 Query 43169 TACAAAGATTTGCATT 43184 || |||||||||||| Sbjct 30589 GACGAAGATTTGCATT 30604 >seq4899 Length=71473 Score = 84.2 bits (92), Expect = 3e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||| ||| | |||||| || |||||| || || ||||| || ||| || ||| | Sbjct 46672 ACGCAGCACGAGATGCAACGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTACGCCC 46613 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCT 43081 || || |||||||| || ||||| ||||| ||||||||||||| ||| | ||| Sbjct 46612 ATCCTCGAGCTGCTTGCCCGCGAAAATGAGACGCTGCTGGTCGGGCGGGATGCT 46559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571634189504800