Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycena_20chlorophos_20[genbank_20GCA_5F001612595.1_202016-04-02] 25,660 sequences; 43,602,020 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq11362 118 7e-22 seq20985 116 2e-21 seq4899 89.7 3e-13 >seq11362 Length=37670 Score = 118 bits (130), Expect = 7e-22 Identities = 167/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 34159 GAATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTC 34218 ||| ||||| || || | ||| |||||||| | || || ||||| ||||||||||| Sbjct 29493 GAAGCCGCCACGGAGACGCAGGACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTC 29552 Query 34219 GGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGT-CGA 34277 || ||| || |||| || | ||||||||| || || ||||| || ||||| | || Sbjct 29553 CGAGAGCGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGTTGCTGATCCGG 29612 Query 34278 CGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATT 34337 |||| | || ||||||||| ||||| ||| | | | | |||| || | || | Sbjct 29613 CGGG-ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCAATCGTGTCCGAGGACT 29671 Query 34338 CGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| |||| |||||| || ||||| ||||| || || || ||||| ||||| Sbjct 29672 CGACCTCCAACGTGATCGTCTTGCCTGTGAGCGTCTTGACGAAGATTTGCAT 29723 Score = 98.7 bits (108), Expect = 6e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 34179 GCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC-AGCTGACGGTCGTCG 34237 |||||||||| | ||| || ||||| |||||||||||| | || || || | || Sbjct 30116 GCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTG-CGACCATCC 30174 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| ||||| || || ||||| |||||| || | | ||||||||| Sbjct 30175 TCGAGCTGCTTGCCGGCGAAGATAAGGCGCTGTTGGTCGGGCGGAATACCCTCCTTGTCC 30234 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | | | | || | || | || ||||| || | |||||||| Sbjct 30235 TGAATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCGACCTCAAGGGTGATGGTC 30294 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 ||||| || | || || ||||||||||||||| Sbjct 30295 TTGCCAGTCAACGTCTTGACAAAGATCTGCATC 30327 >seq20985 Length=2931 Score = 116 bits (128), Expect = 2e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34181 ACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCC 34240 |||| ||| | ||| || ||||| |||||||||||| || ||| |||| || Sbjct 2093 ACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTACGACCGTCTTCG 2152 Query 34241 AACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCT 34300 | ||||||||| || ||||| || ||||||||||| || | || ||||||||| Sbjct 2153 AGCTGCTTGCCAGCAAAAATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGA 2212 Query 34301 ATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTG 34360 || ||| ||| | | | | |||| ||| | || ||||| |||| |||||||| ||| Sbjct 2213 ATTTTTGCCTTGACGTTGTCGATCGTGTCGCTAGACTCGACCTCCAGAGTGATGGTCTTG 2272 Query 34361 CCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || ||||| || || || ||||||||||| Sbjct 2273 CCAGTGAGGGTCTTGACGAAGATCTGCAT 2301 Score = 82.4 bits (90), Expect = 5e-11 Identities = 109/149 (73%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 34194 TACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTG 34253 |||| ||||||| ||||||||||| || || || |||| || | |||||| || | Sbjct 2433 TACTCACTTTCTGAATGTTGTAGTCAGAAAGAGTGCGACCGTCCTCGAGCTGCTTTCCAG 2492 Query 34254 CGAAAATGAGCCGCTGCTGGT-CGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT 34312 ||||||| || |||||||||| || |||| | | ||||||||| ||||| ||| Sbjct 2493 CGAAAATAAGGCGCTGCTGGTCCGGCGGG-ATTCCCTCCTTGTCCTGGATCTTCGCCTTG 2551 Query 34313 AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | | | |||| ||| |||||||||| Sbjct 2552 ACGTTGTCGATCGTGTCGCTCGATTCGAC 2580 >seq4899 Length=71473 Score = 89.7 bits (98), Expect = 3e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | |||||| || || || || || ||||| |||||||||||| | Sbjct 46683 CCACCACGCAGACGCAGCACGAGATGCAACGTCGACTCCTTCTGGATGTTGTAGTCGCTC 46624 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCG 34276 ||| ||| | || || | ||||||||| ||||||||||| |||||||||||| Sbjct 46623 AGCGTACGCCCATCCTCGAGCTGCTTGCCCGCGAAAATGAGACGCTGCTGGTCG 46570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322970965289600