Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycena_20chlorophos_20[genbank_20GCA_5F001612595.1_202016-04-02] 25,660 sequences; 43,602,020 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq20788 132 3e-26 seq23240 96.9 2e-15 >seq20788 Length=3907 Score = 132 bits (146), Expect = 3e-26 Identities = 130/168 (77%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 22740 ACGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCAT 22799 ||| ||| | |||||||| || ||||| ||| || | || || || || || ||| |||| Sbjct 1097 ACGCCTCGTCGCCTTTGCCGCCGTTGAGGGCATCTTCTTCTCGGGCTCGTTCGCGTCCAT 1038 Query 22800 ATTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAG 22859 ||||||||||||||||| |||||||| || ||| | |||||||||||| | ||||| Sbjct 1037 CTTCTGGCTGAAGAAACGCGGTCTCATGCCGGGCTTGACCTTTTCCAACGAGCTCATTAG 978 Query 22860 CCGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCA 22907 ||||||||| || | ||| |||||||| || |||| |||| ||| Sbjct 977 CCGTGACGAGGGCATGCACACCGACTTTGCCTGCCTGCTCTTTACGCA 930 >seq23240 Length=3298 Score = 96.9 bits (106), Expect = 2e-15 Identities = 140/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 33524 CCGATGGGTGCAAATGCGTCAAGATCAAGCTGCGCAAGATACGCATACCAGAGATGGGCG 33583 ||||||| || | ||||||| || | ||| || || || || |||| |||| Sbjct 2918 CCGATGGCCAAAAGTTCGTCAAGGTCCGCGTACGCGCGACGCGTATCCCGCAGATCGGCG 2859 Query 33584 ACAAGTTTGCATCGTT-CACGGCCCAGAAGGGCACGTGCGGCATGATGTACGACCAGTGG 33642 ||||||| ||||| ||||| | ||||||| || |||||| | ||| |||| | Sbjct 2858 ACAAGTTCGCATCTCGACACGGTC-AGAAGGGAACTATCGGCATCACCTACCGCCAGGAG 2800 Query 33643 GACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCAACCCGCATGCGTTC 33702 |||||||| ||||| || || ||| | ||||| ||| | ||||||||||||| || | Sbjct 2799 GACATGCCATTCACCGCAGAGGGCATCGTCCCCGACATTATCATCAACCCGCACGCTATT 2740 Query 33703 CCCTCGCGCATGACG 33717 || || ||||||||| Sbjct 2739 CCTTCCCGCATGACG 2725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356122194620980