Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycena_20chlorophos_20[genbank_20GCA_5F001612595.1_202016-04-02] 25,660 sequences; 43,602,020 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq20788 116 5e-21 >seq20788 Length=3907 Score = 116 bits (128), Expect = 5e-21 Identities = 372/571 (65%), Gaps = 12/571 (2%) Strand=Plus/Plus Query 42054 TAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGG 42113 |||| | || || || || ||| ||||| ||||| || | ||||| | ||||||| Sbjct 934 TAAAGAGCAGGCAGGCAAAGTCGGTGTGCATGCCCTCGTCACGGCTAATGAGCTCGTTGG 993 Query 42114 AAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATC 42173 |||| || | || ||||| || || || || || ||||| || || ||||| || || | Sbjct 994 AAAAGGTCAAGCCCGGCATGAGACCGCGTTTCTTCAGCCAGAAGATGGACGCGAACGAGC 1053 Query 42174 CAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCAC 42233 | || |||||||| || || || || |||||||| | || | || ||| || || Sbjct 1054 CCGAGAAGAAGATGCCCTCAACGGCGGCAAAGGCGACGAGGCGTTCGCCA-AATGTTGAC 1112 Query 42234 T----GTCATGTATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 42288 | ||| || ||||| | || ||||| |||||||| ||| | || || || || Sbjct 1113 TTTTCGTCCTGGATCCAGCGGATG-GCCCACTCGGCCTTGCGTTTGATGCAGGGAATGGT 1171 Query 42289 TTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAA 42348 || | ||| | ||||| || | || | || || | ||||| ||||| | Sbjct 1172 CTCGACGGCGTCGAAGAGGTACTCGCGTTGTGCAGCGTCCTTGATGTATGTGTCGATGAG 1231 Query 42349 AAGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCT 42408 || || | || || || |||||||| || || || || ||||||||||| | Sbjct 1232 GAGGGAGTAGGTCTCGGAGTGGATGTTTTCCATCATGATTTGGAAGCCGTAGAAACAGCG 1291 Query 42409 GGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCC 42468 |||||| | ||||| || || | | || || || | || ||||| || || || Sbjct 1292 GGCCTCTGCGACCTGGACCTCGTTGGAGAAGCGCTCGAGGAGGTTCTCGTTGACAATGCC 1351 Query 42469 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAA 42528 ||| ||| || || || || | |||||| || || | |||| || |||| | Sbjct 1352 GTCCGAGGCAGCGAAGAAGGCGAGGACATGTGAGATGAAGTGGCGCTCGT-CGTTGTTGA 1410 Query 42529 ----TTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATG 42584 || ||||| || | || || || || | || | || || | ||||| || | Sbjct 1411 GCTTGTTGTTCCAGTCGTAGAGGTCCTTGGAGAGGTCCATCTCCTCGGCGGTCCAGAAGG 1470 Query 42585 ATGCTTCTGCCTTTTTATACATATTCCAGAT 42615 | || |||||||| || ||||| | |||||| Sbjct 1471 AGGCCTCTGCCTTCTTGTACATTTGCCAGAT 1501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 670923932101600