Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycena_20chlorophos_20[genbank_20GCA_5F001612595.1_202016-04-02] 25,660 sequences; 43,602,020 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq23568 127 3e-25 seq14690 114 2e-21 seq23569 109 9e-20 seq24360 100 4e-17 seq4220 91.5 2e-14 >seq23568 Length=421 Score = 127 bits (140), Expect = 3e-25 Identities = 120/153 (78%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||||||||| ||||||||||| || || ||||||||||| ||||||||| |||| Sbjct 326 AGGTATCACCAAGCCCGCTATCCGTCGCCTCGCCCGTCGTGGTGGCGTCAAGCGTATCTC 267 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCA 16590 ||| | |||||||||||| || | || | |||||||||||| ||| ||| |||| Sbjct 266 TGGCCTCATCTATGAAGAGACGCGCGGCGTCCTCAAGATCTTCCTCGAGAACGTCATCCG 207 Query 16591 TGATGCTTTCCACTATACCGAGCACGCTAAACG 16623 ||| | || ||| || |||||||| || || Sbjct 206 CGATTCGGTCACCTACACTGAGCACGCCAAGCG 174 >seq14690 Length=1002 Score = 114 bits (126), Expect = 2e-21 Identities = 119/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 16468 CCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGT 16527 || ||| || |||||||| |||||||| ||||| || |||||||| || ||||||||| | Sbjct 375 CCCAGGTATTACCAAGCCCGCTATCCGCCGTCTCGCCCGTCGTGGAGGCGTCAAGCGTAT 434 Query 16528 CTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTAT 16587 |||||| | |||| ||||||| || | ||| | |||||||||||| ||| ||| || Sbjct 435 CTCTGGGCTCATCTACGAAGAGACGCGCGGTGTCCTCAAGATCTTCCTCGAGAACGTCAT 494 Query 16588 CCATGATGCTTTCCACTATACCGAGCACGCTAAACG 16623 || ||| | || || || |||||||| || || Sbjct 495 CCGCGATTCGGTCACTTACACTGAGCACGCCAAGCG 530 >seq23569 Length=416 Score = 109 bits (120), Expect = 9e-20 Identities = 116/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||||||||| |||||||| |||||||| |||||||| || ||||||||| |||| Sbjct 404 AGGTATCACCAAGCCCGCTATCCGCCGTCTGGCCCGTCGTGGCGGCGTCAAGCGTATCTC 345 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCA 16590 || | |||| || |||| || | || | |||||||||||| ||| ||| |||| Sbjct 344 CGGCCTCATCTACGAGGAGACACGCGGCGTCCTCAAGATCTTCCTCGAGAACGTCATCCG 285 Query 16591 TGATGCTTTCCACTATACCGAGCACGCTAAACG 16623 ||| | || || || |||||||| || || Sbjct 284 CGATTCGGTCACTTACACTGAGCACGCCAAGCG 252 >seq24360 Length=2927 Score = 100 bits (110), Expect = 4e-17 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||||||||| |||||||||||||| || ||||||||||| || |||||| |||| Sbjct 1207 AGGTATCACCAAGCCCGCTATCCGTCGTCTCGCCCGTCGTGGTGGTGTAAAGCGTATCTC 1266 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCA 16590 || | |||| || || | |||| || | |||||||||||| ||| || || | Sbjct 1267 GGGCCTCATCTACGAGGAAACCCGTGGAGTGCTCAAGATCTTCCTCGAGAATGTCATTCG 1326 Query 16591 TGATGCTTTCCACTATACCGAGCACGCTAAACG 16623 ||| | || ||| || ||||| || || || Sbjct 1327 TGACTCGGTCACCTACACTGAGCATGCCAAGCG 1359 >seq4220 Length=1111 Score = 91.5 bits (100), Expect = 2e-14 Identities = 85/108 (79%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 16468 CCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGT 16527 || ||| ||||| ||||| ||||| |||||||| ||||| ||||| || ||||||||| | Sbjct 994 CCCAGGTATCACAAAGCCCGCTATTCGTCGTCTCGCTCGCCGTGGAGGCGTCAAGCGTAT 1053 Query 16528 CTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCT 16575 ||| || | |||| || |||| |||| ||| | ||||||||||| Sbjct 1054 CTCCGGTCTCATCTACGAGGAGACCCGTGGTGTCCTCAAGATCTTCCT 1101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79051738882380