Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycena_20chlorophos_20[genbank_20GCA_5F001612595.1_202016-04-02] 25,660 sequences; 43,602,020 total letters Query= NC_006949.1 Length=46900 Score E Sequences producing significant alignments: (Bits) Value seq2146 111 5e-20 >seq2146 Length=17748 Score = 111 bits (122), Expect = 5e-20 Identities = 235/349 (67%), Gaps = 4/349 (1%) Strand=Plus/Minus Query 39897 GACCGGCTCTGGTTATTTGGCCTGACAGGTACAGCCAAGGCTGAACGCCTGATTGAAATT 39956 |||| ||| ||| || | | || ||||| ||||||| || ||||| | | ||| | Sbjct 7459 GACCAGCTTTGGGCTTTCGACGTGGCAGGTGCAGCCAAAGCGCAACGCATTCTGGAAGTG 7400 Query 39957 TTCACATACGCCAGACGGCGATACGGCATCCAGTTATTCATCATCGACAGCCTCATGAAG 40016 ||| |||||| | || || ||||||||| | | ||| | ||||||| ||| | || Sbjct 7399 TTCCGATACGCGCGCCGCCGCTACGGCATCGACCTGTTCGTGATCGACAACCTGACCAAA 7340 Query 40017 TGCGGTATTGGCGATGACGATTACAACGGGCAAAAGGCGTTTGTTGATTCGCTGTGCGAC 40076 |||||| | | ||| ||||| |||| ||| || || ||| || || ||||| ||| Sbjct 7339 TGCGGTTTCGACGACGACGACTACACCGGCCAGAAACGGTTCGTCGAGGAGCTGTCTGAC 7280 Query 40077 TTC--AAGAATAAAACCAACTCTCACATTATCCTCGTCACTCACTCCAGAAAGGGAGACA 40134 ||| | | || || | || | || | | ||||| ||||| | |||||| Sbjct 7279 TTCGCACGTATCGAAGCCACGC--ACGTCGCCGTCGTCGCTCACATGCGCAAGGGACCGG 7222 Query 40135 GCGAGGAGAAACCTACCGGAAAGATGGACGTAAAAGGCTCAGGAGCGATTACAGACCTGA 40194 |||| || || |||| ||||||| |||||||||||| || | || || ||| || Sbjct 7221 GCGAAGACGCGCCCGCCGGGAAGATGGCCGTAAAAGGCTCCGGCGGCATCACCGACATGG 7162 Query 40195 CGGATAACCTGTTTATCATCTGGCGCAATAAAGCTCGCGAGAGAGCGCT 40243 | || | || | | |||||||| ||| |||||||| |||| || Sbjct 7161 CCGACACGGTGGTCGAGGTATGGCGCAACAAACCTCGCGAGCGAGCACT 7113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149912705801040