Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycena_20chlorophos_20[genbank_20GCA_5F001612595.1_202016-04-02] 25,660 sequences; 43,602,020 total letters Query= NC_007805.1 Length=39199 Score E Sequences producing significant alignments: (Bits) Value seq1688 87.8 4e-13 seq2146 80.6 7e-11 >seq1688 Length=26802 Score = 87.8 bits (96), Expect = 4e-13 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 33689 CCTGTGGTGGTGCTGGCGCAGCTCAACCGTGGGCCGAAGGCGCGGGGCAACAAGCGTCCG 33748 || ||||||||||||||||||||||||||| | || || || | ||||||||| ||| Sbjct 18339 CCGGTGGTGGTGCTGGCGCAGCTCAACCGTACGGTGACGGGCCGTGCCAACAAGCGCCCG 18280 Query 33749 ACCAAGAGCGACCTGCGTGACTCCGGGCAGATCGAGGCCGATGCGGACGTGGTGGTGCTG 33808 |||| | |||||||| || || || |||||||| | || |||||| | || | Sbjct 18279 ACCATGTCGGACCTGCGCGAGTCGGGCGAGATCGAGCAGAAGGCTGACGTGATCCTGTTC 18220 Query 33809 GTCCACAGGGA 33819 ||||| |||| Sbjct 18219 CTCCACCGGGA 18209 >seq2146 Length=17748 Score = 80.6 bits (88), Expect = 7e-11 Identities = 122/171 (71%), Gaps = 2/171 (1%) Strand=Plus/Minus Query 30931 ATGGCTCGTGCTCGTAACATCAAGCCCGGGATCATGGCGAACGAGGAGTTGGCAGAGCTC 30990 ||||| || || || |||||||||||||| || | |||||| || ||||| ||| | Sbjct 9507 ATGGCGCGCGCACGAAACATCAAGCCCGGCTTCTTTAAGAACGAAGACTTGGCTGAGTGC 9448 Query 30991 -AGCCACTCGCATCGCCTCCTGTTCATCTATTTGTGGATGTTGGCCGACAGGGAAGGGCG 31049 | || | || |||| | |||||| | | ||| ||| || ||||||||||| Sbjct 9447 GATCCGTTAGC-TCGCATTCTGTTCGCCGGCCTTTGGTGCCAGGCAGATAGGGAAGGGCG 9389 Query 31050 CCTGGAGGATCGACCGAAGCGCATCAAAGCAGAAGCCTTTCCCTACGATGA 31100 ||| ||||||||||| |||||| | ||||| || || || ||||| || Sbjct 9388 CCTTGAGGATCGACCCAAGCGCCTTAAAGCCGAGTGTTTGCCGTACGACGA 9338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125277014892120