Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycena_20chlorophos_20[genbank_20GCA_5F001612595.1_202016-04-02] 25,660 sequences; 43,602,020 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq18154 104 5e-17 seq12405 93.3 9e-14 seq20788 89.7 1e-12 >seq18154 Length=6809 Score = 104 bits (114), Expect = 5e-17 Identities = 108/142 (76%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 279705 CTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCCGAT 279764 ||||| |||||||||||||||||||| || || | || || || || | |||||||| Sbjct 3669 CTGTCCGGTGGTTGGAAGATGAAGCTCGCGCTTGCGCGTGCTATGCTTTTCCGTGCCGAC 3610 Query 279765 GTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTAGTG 279824 |||| ||||| |||||||| |||||||| | ||| | |||| | |||||||| | | Sbjct 3609 ATCCTGCTGCTCGATGAGCCGACCAACCATCTCGACGTCGTCAACATCGCCTGGCTCGAG 3550 Query 279825 TCCTACCTAACCAGTCTGAAGA 279846 |||||| ||| | || |||| Sbjct 3549 AACTACCTCACCGGCCTCAAGA 3528 >seq12405 Length=13758 Score = 93.3 bits (102), Expect = 9e-14 Identities = 132/186 (71%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 218918 AGGACGATGGTTCTTCGATTGAGCCCGAGTGGTATGTGCCTGCTATTCCGTTTTTGCTCG 218977 ||||||| || ||| ||||||||||||||||| |||| | | ||| | |||||| Sbjct 13372 AGGACGAGGGCCACTCGGTTGAGCCCGAGTGGTATCTGCCGATTGTGCCGATGGTGCTCG 13313 Query 218978 TAAATGGTGCCAATGGTATCGGGACAGGGTTCAGTACTGACATTCCTTCTTACAATCCCA 219037 | || || || | ||||||||||| |||| || || |||| || || | ||| |||| Sbjct 13312 TCAACGGCGCGGACGGTATCGGGACGGGGTGGAGCACGAACATCCCGTCGTTCAACCCCA 13253 Query 219038 AGGACATCATTGACAACGTCAAGCGTCTCATATCTGGCAAGGAGATGGTACCGATGTCTC 219097 ||| || | || ||| | || || || ||| |||||||||| |||||| || Sbjct 13252 CGGAGATTGTGGAGAACCTGCGCCGGCTGATGAAGGGCGAGGAGATGGTGCCGATGCATC 13193 Query 219098 CGTGGT 219103 | |||| Sbjct 13192 CTTGGT 13187 >seq20788 Length=3907 Score = 89.7 bits (98), Expect = 1e-12 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| | ||| ||||| | ||||| |||||||||||||| || Sbjct 625 TCGAAGAAGTTGGTCTTGCCTTGCAGCGAGATCATGTCCATAAAGTCGAAGGGGTTGCTG 684 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 | |||||| ||| | ||| ||||| || | | |||||| || || ||||| | Sbjct 685 ACGTTGTACACCTTCTTGTTGCCTAGTGCGACAAGTAGGCGGTCGGCGACGAACTCGATG 744 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAAT 251714 ||||| | ||| || | | ||||||||| || Sbjct 745 TACTGGCACATGAGCTTGGCGTTCATGCCGAT 776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027498879380060