Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycena_20chlorophos_20[genbank_20GCA_5F001612595.1_202016-04-02] 25,660 sequences; 43,602,020 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq20985 120 3e-22 seq11362 102 9e-17 >seq20985 Length=2931 Score = 120 bits (132), Expect = 3e-22 Identities = 146/194 (75%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || |||| || |||||||| ||||| || Sbjct 2110 CTCCTTCTGGATGTTGTAGTCGCTCAAGGTACGACCGTCTTCGAGCTGCTTGCCAGCAAA 2169 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 || || ||||||||||| | || | || |||||||||| ||| |||||| |||| || Sbjct 2170 AATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCC-TGAATTTTTGCCTTGA-CG 2227 Query 42136 TCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 42194 | | | | ||||||||| || || || || | |||||||| ||||| || || ||||| Sbjct 2228 TTGTCGATCGTGTCGCTAGACTCGACCTCCAGAGTGATGGTCTTGCCAGTGAGGGTCTTG 2287 Query 42195 ACAAAGATTTGCAT 42208 || ||||| ||||| Sbjct 2288 ACGAAGATCTGCAT 2301 Score = 96.9 bits (106), Expect = 4e-15 Identities = 111/147 (76%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 42015 CTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCG 42074 ||| | || ||||| ||||| |||| ||||| || |||| || |||||||| |||||| Sbjct 2435 CTCACTTTCTGAATGTTGTAGTCAGAAAGAGTGCGACCGTCCTCGAGCTGCTTTCCAGCG 2494 Query 42075 AATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGC 42134 || || || ||||||||||| | || | | |||||||||| ||| || |||| | Sbjct 2495 AAAATAAGGCGCTGCTGGTCCGGCGGGATTCCCTCCTTGTCCTGGATCTTCGCCTTGA-C 2553 Query 42135 GTCG-CCACCGTGTCGCTCGATTCCAC 42160 || | | | ||||||||||||||| || Sbjct 2554 GTTGTCGATCGTGTCGCTCGATTCGAC 2580 Score = 84.2 bits (92), Expect = 2e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 42019 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 42078 |||| ||||| ||||| |||| || || || | || || |||||||| |||||||| | Sbjct 2813 CCTTCTGAATGTTGTAGTCAGAAAGGGTACGACCATCCTCGAGCTGCTTCCCAGCGAAGA 2872 Query 42079 TGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTT 42124 |||| ||||||||||||| || | | |||||||||| ||| || Sbjct 2873 TGAGACGCTGCTGGTCGGGCGGGATTCCCTCCTTGTCCTGGATCTT 2918 >seq11362 Length=37670 Score = 102 bits (112), Expect = 9e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || | || || || |||| || |||||||| ||||| || Sbjct 29532 CTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAA 29591 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| || ||||| || | || | || |||||||||| ||| || || | ||| Sbjct 29592 GATGAGGCGTTGCTGATCCGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCA-CGT 29650 Query 42137 CGCCAC-CGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | || |||||| || || || || | |||||| || ||||| || |||||||| | Sbjct 29651 TGTCAATCGTGTCCGAGGACTCGACCTCCAACGTGATCGTCTTGCCTGTGAGCGTCTTGA 29710 Query 42196 CAAAGATTTGCAT 42208 | ||||||||||| Sbjct 29711 CGAAGATTTGCAT 29723 Score = 89.7 bits (98), Expect = 6e-13 Identities = 138/196 (70%), Gaps = 1/196 (1%) Strand=Plus/Plus Query 42015 CTCTCCTTT-TGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGC 42073 ||| ||||| || || |||||||| | || || || | || || |||||||| ||||| Sbjct 30409 CTCACCTTTCTGGATGTTGTAATCCGAGAGGGTGCGACCATCTTCAAGCTGCTTGCCAGC 30468 Query 42074 GAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAG 42133 ||| ||||| ||||| ||||| | || | | ||||||||| ||| || |||| Sbjct 30469 GAAGATGAGGCGCTGTTGGTCAGGCGGGATCCCCTCCTTGTCTTGGATCTTGGCCTTGAC 30528 Query 42134 CGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | | ||||| || || || || | |||||||| ||||| || | ||||| Sbjct 30529 ATTGTCGATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCAGTCAAGGTCTT 30588 Query 42194 TACAAAGATTTGCATT 42209 || |||||||||||| Sbjct 30589 GACGAAGATTTGCATT 30604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543038564494400