Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycena_20chlorophos_20[genbank_20GCA_5F001612595.1_202016-04-02] 25,660 sequences; 43,602,020 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq11362 114 1e-20 seq20985 105 7e-18 seq4899 82.4 8e-11 >seq11362 Length=37670 Score = 114 bits (126), Expect = 1e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 64254 CTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAA 64313 |||| || ||||||||||| | || |||||| | ||||||||||||||||| || | | Sbjct 30414 CTTTCTGGATGTTGTAATCCGAGAGGGTGCGACCATCTTCAAGCTGCTTGCCAGCGAAGA 30473 Query 64314 TGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCT 64373 |||| ||||| ||||| || || || || || || ||||| || || ||| ||| | Sbjct 30474 TGAGGCGCTGTTGGTCAGGCGGGATCCCCTCCTTGTCTTGGATCTTGGCCTTGACATTGT 30533 Query 64374 CCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGA 64433 | | || || || || || || | || | ||||||||| ||||| || || |||| Sbjct 30534 CGATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTGACGA 30593 Query 64434 AAATTTGCATT 64444 | ||||||||| Sbjct 30594 AGATTTGCATT 30604 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || || || | |||||| || || || |||||||| || | || ||||| |||| Sbjct 29512 AGGACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGACCGTCC 29571 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||||||||| ||| | ||||| || ||||| || || || || || || || || Sbjct 29572 TCGAGCTGCTTGCCAGCAAAGATGAGGCGTTGCTGATCCGGCGGGATGCCCTCCTTGTCC 29631 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || || | || || || || || || | || | ||| Sbjct 29632 TGGATCTTCGCCTTCACGTTGTCAATCGTGTCCGAGGACTCGACCTCCAACGTGATCGTC 29691 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| || | || || ||||| |||||||| Sbjct 29692 TTGCCTGTGAGCGTCTTGACGAAGATTTGCAT 29723 >seq20985 Length=2931 Score = 105 bits (116), Expect = 7e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| ||||| || || || |||||||| || | ||| || ||||||| |||||| Sbjct 2099 TGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTACGACCGTCTTCGAGCTGC 2158 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 ||||| ||| |||| || ||||||||||| ||||| || || || || || || |||||| Sbjct 2159 TTGCCAGCAAAAATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATTTTT 2218 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 ||| || || | || || | | || || || | ||| | ||||||||| || Sbjct 2219 GCCTTGACGTTGTCGATCGTGTCGCTAGACTCGACCTCCAGAGTGATGGTCTTGCCAGTG 2278 Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443 | || || ||||| || ||||| Sbjct 2279 AGGGTCTTGACGAAGATCTGCAT 2301 >seq4899 Length=71473 Score = 82.4 bits (90), Expect = 8e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||||| ||||| | |||||| || || || |||||||| || Sbjct 46684 ACCACCACGCAGACGCAGCACGAGATGCAACGTCGACTCCTTCTGGATGTTGTAGTCGCT 46625 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || ||| | || || ||||||||||| || ||||||| |||||||||||||| || Sbjct 46624 CAGCGTACGCCCATCCTCGAGCTGCTTGCCCGCGAAAATGAGACGCTGCTGGTCGGGCGG 46565 Query 64336 AAT 64338 || Sbjct 46564 GAT 46562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499484538930400