Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycena_20chlorophos_20[genbank_20GCA_5F001612595.1_202016-04-02] 25,660 sequences; 43,602,020 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq11362 132 1e-25 seq20985 120 7e-22 seq4899 86.0 1e-11 >seq11362 Length=37670 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | |||||| |||||||| ||||||||||| |||| ||||||||| | | || Sbjct 29503 CGGAGACGCAGGACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTG 29562 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || |||||||| || || |||||||| || ||||| ||||| || || Sbjct 29563 CGACCGTCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGTTGCTGATCCGGCGGGATGCCC 29622 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||||||| || | ||||| | | || || |||||| Sbjct 29623 TCCTTGTCCTGGATCTTCGCCTTCACGTTGTCAATCGTGTCCGAGGACTCGACCTCCAAC 29682 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||||| || ||||| || || || || ||||| Sbjct 29683 GTGATCGTCTTGCCTGTGAGCGTCTTGACGAAGATTTG 29720 Score = 123 bits (136), Expect = 6e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 199421 ACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCC 199480 || ||||||||||| |||||||| |||| ||||||||| ||| || | ||||| || Sbjct 30118 ACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCATCCTCG 30177 Query 199481 AGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGA 199540 |||||||| ||||||||||| || ||||| ||||| || ||| || || |||||| Sbjct 30178 AGCTGCTTGCCGGCGAAGATAAGGCGCTGTTGGTCGGGCGGAATACCCTCCTTGTCCTGA 30237 Query 199541 ATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTA 199600 ||||| ||| ||| |||| |||||| | | || || || | ||||| ||||| Sbjct 30238 ATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCGACCTCAAGGGTGATGGTCTTG 30297 Query 199601 CCCGTGAGAGTTTTCACAAAAATTTG 199626 || || | || || ||||| || || Sbjct 30298 CCAGTCAACGTCTTGACAAAGATCTG 30323 >seq20985 Length=2931 Score = 120 bits (132), Expect = 7e-22 Identities = 147/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| |||||||||||||| |||| ||||||||| ||| || | || ||||| ||||| Sbjct 2098 GTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTACGACCGTCTTCGAGCTG 2157 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 ||| || || || || || ||||||||||||||| || || || |||||||| || Sbjct 2158 CTTGCCAGCAAAAATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATTTT 2217 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 | ||| ||| |||| ||||| | | || || |||| ||||| ||||| || || Sbjct 2218 TGCCTTGACGTTGTCGATCGTGTCGCTAGACTCGACCTCCAGAGTGATGGTCTTGCCAGT 2277 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 ||| || || || || || || Sbjct 2278 GAGGGTCTTGACGAAGATCTG 2298 >seq4899 Length=71473 Score = 86.0 bits (94), Expect = 1e-11 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || || || | ||||||||||| |||| ||||||||| || || Sbjct 46677 CGCAGACGCAGCACGAGATGCAACGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTA 46618 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 | ||||| || |||||||| || ||||| ||||||||||||||||| || Sbjct 46617 CGCCCATCCTCGAGCTGCTTGCCCGCGAAAATGAGACGCTGCTGGTCGGG 46568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178534007419220