Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycena_20chlorophos_20[genbank_20GCA_5F001612595.1_202016-04-02] 25,660 sequences; 43,602,020 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq11362 141 1e-28 seq20985 129 7e-25 seq4899 98.7 1e-15 seq20986 82.4 9e-11 >seq11362 Length=37670 Score = 141 bits (156), Expect = 1e-28 Identities = 163/217 (75%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| ||||| || | || |||||| ||||| |||||||| || || ||||| | Sbjct 29508 ACGCAGGACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGACC 29567 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 ||| |||||||||||||| || || || | ||| ||||| || | ||| | || |||||| Sbjct 29568 GTCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGTTGCTGATCCGGCGGGATGCCCTCCTT 29627 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 |||| ||||||| ||| | ||| | | | |||||| || || || |||| ||||| Sbjct 29628 GTCCTGGATCTTCGCCTTCA-CGTTGTCAATCGTGTCCGAGGACTCGACCTCCAACGTGA 29686 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || ||||| || ||||| || || ||||||||||| Sbjct 29687 TCGTCTTGCCTGTGAGCGTCTTGACGAAGATTTGCAT 29723 Score = 125 bits (138), Expect = 8e-24 Identities = 156/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| || | || |||||| ||||| ||||||||| | ||||| | || || Sbjct 30117 CACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCATCCTC 30176 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||||||||||||| || | |||||| ||||||| ||| | | |||||||||| Sbjct 30177 GAGCTGCTTGCCGGCGAAGATAAGGCGCTGTTGGTCGGGCGGAATACCCTCCTTGTCCTG 30236 Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562 ||||| ||||| ||| | | | ||||| || || || || | |||||||| | Sbjct 30237 AATCTTGGCCTTGA-CGTTGTCGATGGTGTCCGAAGACTCGACCTCAAGGGTGATGGTCT 30295 Query 46563 TGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| |||| ||| || |||||||| ||||| Sbjct 30296 TGCCAGTCAACGTCTTGACAAAGATCTGCAT 30326 Score = 109 bits (120), Expect = 6e-19 Identities = 145/200 (73%), Gaps = 1/200 (1%) Strand=Plus/Plus Query 46399 ACTCTCCTTT-TGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGG 46457 |||| ||||| ||||| ||||| || || || ||||| | || || ||||||||||| | Sbjct 30408 ACTCACCTTTCTGGATGTTGTAATCCGAGAGGGTGCGACCATCTTCAAGCTGCTTGCCAG 30467 Query 46458 CGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGA 46517 |||| || | |||||| ||||| | ||| | | ||||||||| |||||| ||||| Sbjct 30468 CGAAGATGAGGCGCTGTTGGTCAGGCGGGATCCCCTCCTTGTCTTGGATCTTGGCCTTGA 30527 Query 46518 GCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTT 46577 | | | ||||| || || || || | |||||||| ||||| |||| || | Sbjct 30528 CATTGTCGATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCAGTCAAGGTCT 30587 Query 46578 TAACAAAGATTTGCATTTTG 46597 | || |||||||||||| || Sbjct 30588 TGACGAAGATTTGCATTGTG 30607 >seq20985 Length=2931 Score = 129 bits (142), Expect = 7e-25 Identities = 146/193 (76%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||| | || || |||| |||||||||||||| || || Sbjct 2110 CTCCTTCTGGATGTTGTAGTCGCTCAAGGTACGACCGTCTTCGAGCTGCTTGCCAGCAAA 2169 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| |||||||||||| | || | || |||||||||| || || ||||| ||| Sbjct 2170 AATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATTTTTGCCTTGA-CGT 2228 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||||||| || || || |||| |||||||| ||||| || || || || | Sbjct 2229 TGTCGATCGTGTCGCTAGACTCGACCTCCAGAGTGATGGTCTTGCCAGTGAGGGTCTTGA 2288 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 2289 CGAAGATCTGCAT 2301 Score = 122 bits (134), Expect = 1e-22 Identities = 118/149 (79%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 46398 TACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGG 46457 ||||| | || || || |||||||| || |||||||| |||| ||||||||||| || | Sbjct 2433 TACTCACTTTCTGAATGTTGTAGTCAGAAAGAGTGCGACCGTCCTCGAGCTGCTTTCCAG 2492 Query 46458 CGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGA 46517 |||| || | |||||||||||| | ||| | | |||||||||| ||||||| ||||| Sbjct 2493 CGAAAATAAGGCGCTGCTGGTCCGGCGGGATTCCCTCCTTGTCCTGGATCTTCGCCTTGA 2552 Query 46518 GCGTCG-CCACCGTGTCGCTCGATTCCAC 46545 ||| | | | ||||||||||||||| || Sbjct 2553 -CGTTGTCGATCGTGTCGCTCGATTCGAC 2580 Score = 89.7 bits (98), Expect = 6e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| || || |||||||| || || || || | || ||||||||||| || ||||| | Sbjct 2813 CCTTCTGAATGTTGTAGTCAGAAAGGGTACGACCATCCTCGAGCTGCTTCCCAGCGAAGA 2872 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGA 46517 | | ||||||||||||| ||| | | |||||||||| ||||||| ||||| Sbjct 2873 TGAGACGCTGCTGGTCGGGCGGGATTCCCTCCTTGTCCTGGATCTTCGCCTTGA 2926 >seq4899 Length=71473 Score = 98.7 bits (108), Expect = 1e-15 Identities = 90/114 (79%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| ||| |||||||| || |||||| ||||| ||||||||| || || ||| | Sbjct 46672 ACGCAGCACGAGATGCAACGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTACGCCC 46613 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCT 46491 || |||||||||||||| ||||| || | ||||||||||||| ||| | ||| Sbjct 46612 ATCCTCGAGCTGCTTGCCCGCGAAAATGAGACGCTGCTGGTCGGGCGGGATGCT 46559 >seq20986 Length=4064 Score = 82.4 bits (90), Expect = 9e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| |||||||| || || || || |||| |||||||||||||| ||||| | Sbjct 254 CCTTCTGGATGTTGTAGTCCGAAAGGGTACGTCCGTCCTCGAGCTGCTTGCCCGCGAAGA 313 Query 46464 TCAAGCGCTGCTGGTCGG 46481 | | |||||||||||||| Sbjct 314 TGAGGCGCTGCTGGTCGG 331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565057099783200