Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycena_20chlorophos_20[genbank_20GCA_5F001612595.1_202016-04-02] 25,660 sequences; 43,602,020 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq20788 235 1e-56 seq10739 98.7 2e-15 seq3206 87.8 3e-12 >seq20788 Length=3907 Score = 235 bits (260), Expect = 1e-56 Identities = 400/573 (70%), Gaps = 19/573 (3%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| | ||| |||||||||||| ||||| || || Sbjct 1501 ATCTGGCAAATGTACAAGAAGGCAGAGGCCTCCTTCTGGACCGCCGAGGAGATGGACCTC 1442 Query 25537 GCCAAGGACATGGACGGCTGGTAC-----GCTCTATCCAAAGACGAGCAGCATTT--TCT 25589 |||||||| | ||| |||| || |||| | ||| ||||||| || || ||| Sbjct 1441 TCCAAGGACCTCTACGACTGGAACAACAAGCTCAA--CAACGACGAGCGCCACTTCATCT 1384 Query 25590 CAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGA 25649 || | || | || ||||| || ||||| || || || || |||||||| || ||| Sbjct 1383 CACAT--GTCCTCGCCTTCTTCGCTGCCTCGGACGGCATTGTCAACGAGAACCTCCTCGA 1326 Query 25650 GAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGC 25709 | | ||| ||| || || ||| || |||||| ||||||||||| ||||| || Sbjct 1325 GCGCTTCTCCAACGAGGTCCAGGTCGCAGAGGCCCGCTGTTTCTACGGCTTCCAAATCAT 1266 Query 25710 CATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGA 25766 || ||||| | ||||| ||| || || || || || || ||||| | || Sbjct 1265 GATGGAAAACATCCACTCCGAGACCTACTCC---CTCCTCATCGACACATACATCAAGGA 1209 Query 25767 CGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAA 25826 || || | | || || || | ||| ||||| ||| ||| ||||||| | || Sbjct 1208 CGCTGCACAACGCGAGTACCTCTTCGACGCCGTCGAGACCATTCCCTGCATCAAACGCAA 1149 Query 25827 GGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGT 25886 ||| ||||||||| |||||| | | | | | || |||||||| || || || Sbjct 1148 GGCCGAGTGGGCCATCCGCTGGATCCAGGACGAAAAGTCAACATTTGGCGAACGCCTCGT 1089 Query 25887 AGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCT 25946 |||||||| || || ||||||||||| ||| || ||||| ||| ||||||||||||| Sbjct 1088 CGCCTTTGCCGCCGTTGAGGGCATCTTCTTCTCGGGCTCGTTCGCGTCCATCTTCTGGCT 1029 Query 25947 CAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACG 26005 ||| | | | || | |||||| || || |||||||||||||||||| ||| | |||| Sbjct 1028 GAAGAA-ACGCGGTCTCATGCCGGGCTTGACCTTTTCCAACGAGCTCATTAGCCGTGACG 970 Query 26006 AGGGTCTCCACAGAGATTTTGCCTGCCTGCTCT 26038 |||| | |||| || |||||||||||||||| Sbjct 969 AGGGCATGCACACCGACTTTGCCTGCCTGCTCT 937 >seq10739 Length=19748 Score = 98.7 bits (108), Expect = 2e-15 Identities = 183/264 (69%), Gaps = 6/264 (2%) Strand=Plus/Minus Query 221354 GACACCGGACTCCCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAA--G 221411 ||| ||||||| || ||||||| |||||| || || | || | || | || | | | Sbjct 2999 GACGCCGGACTGCCCTCGTACGTCTCGTACGGCCCATCACGTGCCGC--GAGCTCCACCG 2942 Query 221412 ACTGCGTC-AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCC 221470 || || || || || |||||||||| ||||| |||||| | ||||| ||||||| Sbjct 2941 AC-GCCTCGAGCGCGCCGTGGTAGATCGTCTCGAAGATCTGGATATTGAGCGCCTTGGCC 2883 Query 221471 TCGGGAGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCG 221530 ||||| || ||| ||||| |||||| | || || || || ||||| || || || Sbjct 2882 TCGGGTGACTCGAACGGCATGCGCAGCGCGAGGAACACATCTGCGAGTCCTTGCACGCCA 2823 Query 221531 ATACCGATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTG 221590 | ||| || |||| || | | | || || | || || || | ||| || |||||| Sbjct 2822 ACACCAATCGGCCGATGGCGCATATTCGACTTGCGCGTCTCGGGGATGGGGTAGAAGTTG 2763 Query 221591 ACGTCGATCAGATTGTTGAGGTTC 221614 |||||||| | |||||||||| Sbjct 2762 ACGTCGATGATGCGGTTGAGGTTC 2739 Score = 87.8 bits (96), Expect = 3e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 222106 GTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGC 222165 ||| ||||| | | || || || || || || || ||||||||||| || |||||||| Sbjct 2125 GTTCTTCCTTAAGTTCAGGAAATCGAAGATATCTGCATGCCACGGCTCGAGGTAGACGGC 2066 Query 222166 CAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGAT 222225 | ||||| || ||||||||||| || |||||||| || | || | || ||||| Sbjct 2065 GATGGCGCCAGGACGCTTGTTGCCGCCTTGATCCACATACCGCGCCGTCGAGTCGAAGAC 2006 Query 222226 GCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACG 222278 ||| | |||| || | ||||| || ||| || ||||| |||||||| Sbjct 2005 GCGCAACATCGGAACGATGCCGTTCGACGAACCATTCGTGCCTGCAATGTACG 1953 >seq3206 Length=10729 Score = 87.8 bits (96), Expect = 3e-12 Identities = 131/181 (72%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 221420 AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTT-GGCCTCGGGAGA 221478 || ||||| || ||||| ||||| |||||| || |||||| ||||| ||| || || || Sbjct 9164 AGCGCAGCATGATAGATCGTCTCGAAGATCTGCTGGTTGAG-CTCTTTGGCTTCCGGTGA 9222 Query 221479 AGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGAT 221538 ||| ||||| ||||| ||| || ||||||| || || || || || || || || Sbjct 9223 CTCGAACGGCATGCGCAGACACTGGAACGCGTCGGCAAGACCTTGGACGCCAATTCCAAT 9282 Query 221539 GGGCCTGTGTCTCCTGTTGGAAGCGGCC-GCTTCTGGCACGGGATAAAAGTTGACGTCGA 221597 |||| || | | | || || ||| | || || || | |||||| |||||||||||| Sbjct 9283 AGGCCGATGGCGCATATTCGA-GCGACGTGCCTCGGGAATGGGATAGTAGTTGACGTCGA 9341 Query 221598 T 221598 | Sbjct 9342 T 9342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928546873030400