Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycena_20chlorophos_20[genbank_20GCA_5F001612595.1_202016-04-02] 25,660 sequences; 43,602,020 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq3206 105 6e-18 seq20985 96.9 3e-15 seq2984 82.4 7e-11 >seq3206 Length=10729 Score = 105 bits (116), Expect = 6e-18 Identities = 489/761 (64%), Gaps = 30/761 (4%) Strand=Plus/Plus Query 146569 TGCGCCGCAGGTTTTGTGCGCAAATAATACATGCCCGTTTTGAGGCCACATCGCCACGAG 146628 |||||||| ||||| || || | ||||||||||||||| || ||||| | ||||| | Sbjct 8546 TGCGCCGCGGGTTTCGTCCGGAGATAATACATGCCCGTCTTCAGGCCTCTCCGCCAACCG 8605 Query 146629 TGATTGTGAATCGAAGTCATGATGGCGTAC---GTCGGCTCCGCCACGAAAAGATTAAAC 146685 | ||| ||||| |||| | || || || |||||| |||| | | ||| | Sbjct 8606 TAGAAGTGCATCGAGGTCA-GCTG-CG-ACATGGTCGGCGCCGCAAGATGCACATTGAGG 8662 Query 146686 GATTGGCTTTGATCTATGAAAGCGTTGCGGTCGGCCGCCATCTCAATCATGCGTTTTGTC 146745 ||||| || ||||| || ||| ||||| |||| ||| | || | |||| || Sbjct 8663 CTCTGGCTCTGGCAGATGAACGCCCCGCGATCGGCAGCCAGCTCGAGCA--CCTTTT-TC 8719 Query 146746 T---TCATTTCCCAAGCGGTTTTGTACAGCCCCTTAACGCTATCTGGAATACCTTCAATG 146802 | | || ||||| |||| ||||| | | |||| ||| || || || || Sbjct 8720 TGGCTGATCTCCCAGACGGTCTTGTAGATCGCCTTCACGTCGTCGGGGATGTTGGGGATA 8779 Query 146803 TTTTGAATAGAGCCCTTGTGCGCAAAAATAGTGTTTCGTATTTCGGGCGTGTAA-AGGTT 146861 ||||| | ||||| ||||| || | || ||||| || | | ||| | | | Sbjct 8780 TTTTGCACCGAGCCGTTGTGTGCGATGATTGTGTTCTTCATGT-GCTCGTCCCACAAGCC 8838 Query 146862 TAGTTTAATGAGGTCATCAATTAAATACTGATTGACCACTTGAAACTCGCCCGCCAGCAC 146921 || || | | || | | || || ||| || || |||||||||| || ||| Sbjct 8839 CAGATTGACCAATTCCCGCAGCAGCCACGGACAGACGACCTGGAACTCGCCCGACAACAC 8898 Query 146922 ACGTCTGAGATACACATTGCTAGTGAAAGGCTCAAAAGACTCATTATTGCCTAATATTTG 146981 |||| || | ||||| ||| | ||||| || | || |||||||| | || || Sbjct 8899 CCGTCGCGTGTAGATGTTGCTGGTGTACGGCTCGAAGCATTCGTTATTGCCGAGGATCTG 8958 Query 146982 GGCCGTGGTTGCGGTAGGCATGTACGCCACCAACAATGAATTTCGCAGACCGTACGCACG 147041 | || | || || ||||| ||| || || ||||| |||| |||| | Sbjct 8959 GCTAGTCGACGCTGTCGGCATCGGAGCCGTCAGCAGCGAATTGCGCAACCCGTGTCGAGC 9018 Query 147042 GATGTTGTCCTTCAAAGTTTGCCAGTCCCACATCGACGAGGGCGTCACGTTCCACATGTC 147101 ||| ||| ||| | | ||||||||| | ||| ||||| ||| ||||||||| Sbjct 9019 GATCTTGAGCTTGAGCTCGTCCCAGTCCCAAAGCGAGCTCGGCGTTACGCCCCACATGTC 9078 Query 147102 GTACTGGAGCA--CTCCTCGACTGGCGGGACTGCCAGCGAACGTAGTGTA----GCTTCC 147155 |||||| || | | | |||| ||||||||||| | | |||| ||| | ||| Sbjct 9079 GTACTGCAGGATGCCCTGCGAC--GCGGGACTGCCTGAGTACGTCTCGTACGGCCCATCC 9136 Query 147156 GTCGCGCTGCGCCAATTCACAGCTTGCCTCGAGCGCTCCATAGTATATGGTTTCGGCGAT 147215 ||||| |||| || ||| ||||||||||| ||| || || || ||| ||| Sbjct 9137 GTCGC----AGCCATCTCTGTGCTGGCCTCGAGCGCAGCATGATAGATCGTCTCGAAGAT 9192 Query 147216 TTGTTTGTTTAGGACGGTCGCTTCTTCGCT--CTCGTAAGGCATACGCAGAAGCACAAAG 147273 || | ||| || | | ||||| || | |||| | ||||| |||||| | || Sbjct 9193 CTGCTGGTTGAGCTCTTTGGCTTC--CGGTGACTCGAACGGCATGCGCAGACACTGGAAC 9250 Query 147274 GCATCGGCCAAACCCTGGATACCGACGCCGATAGGTCGATG 147314 || ||||| | ||| |||| || | || ||||| ||||| Sbjct 9251 GCGTCGGCAAGACCTTGGACGCCAATTCCAATAGGCCGATG 9291 >seq20985 Length=2931 Score = 96.9 bits (106), Expect = 3e-15 Identities = 148/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 131913 AAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTT 131972 ||||||| || | | ||||| || || |||||||||||||||| |||||| |||| Sbjct 2091 AAACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTACGACCGTCTT 2150 Query 131973 CGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGG 132032 ||||||| || || | | | || || ||||| || || ||||| ||||| || || || Sbjct 2151 CGAGCTGCTTGCCAGCAAAAATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCT 2210 Query 132033 TAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTT 132092 ||||||| || | | || | || ||| | | ||| || || | || | || | Sbjct 2211 GAATTTTTGCCTTGACGTTGTCGATCGTGTCGCTAGACTCGACCTCCAGAGTGATGGTCT 2270 Query 132093 TACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 | ||||| || || || | ||| |||||||| Sbjct 2271 TGCCAGTGAGGGTCTTGACGAAGATCTGCAT 2301 >seq2984 Length=29086 Score = 82.4 bits (90), Expect = 7e-11 Identities = 152/221 (69%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGC 146952 ||||| || || |||||||||| ||||| || | || | ||||| ||| | ||| Sbjct 25318 TTGACGACCTGGAACTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTGTACGGC 25259 Query 146953 TCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACC 147012 || || |||| || ||||| | || ||| ||| | ||||| ||||| || Sbjct 25258 TCGAAGCACTCGTTGTTGCCCAGGATCTGGCTCGTCGACGCGGTCGGCATCGGTGCGGTG 25199 Query 147013 AACAATGAATTTCGCAGACCGTACGCACGG--ATGTTGTCCTTCAAAGTTTGCCAGTCCC 147070 | ||| || || ||||| |||| |||||| || |||||||| | |||||||||| Sbjct 25198 AGCAACGAGTTGCGCAGCCCGT--GCACGGCGATCTTGTCCTTGAGGCCCTGCCAGTCCC 25141 Query 147071 ACATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGC 147111 | | ||| |||||||| ||||| |||| | |||||| Sbjct 25140 AGAGGTCCGACGGCGTCACTCCCCACAAGTCGAATTGGAGC 25100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476458326957600