Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycena_20chlorophos_20[genbank_20GCA_5F001612595.1_202016-04-02] 25,660 sequences; 43,602,020 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq11362 114 4e-20 seq20985 102 2e-16 seq2061 102 2e-16 seq22975 91.5 4e-13 >seq11362 Length=37670 Score = 114 bits (126), Expect = 4e-20 Identities = 113/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 140528 AACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTC 140587 ||| || || || || ||||| || ||||| || || || || | || || ||||| || Sbjct 29791 AACCAGGTGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGACAGAGTACGTCCATCCTC 29850 Query 140588 AAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTG 140647 ||||||||| || || ||||| || || ||||||||||| || ||||| ||||| ||||| Sbjct 29851 AAGTTGTTTGCCCGCGAAGATAAGGCGCTGCTGATCAGGCGGGATTCCCTCTTTGTCCTG 29910 Query 140648 AATTTTAGCTTTTACATTATCAATCG 140673 || || ||||| || || ||||||| Sbjct 29911 GATCTTGGCTTTGACGTTGTCAATCG 29936 Score = 98.7 bits (108), Expect = 3e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || || || || || || ||||| || || || || || || || | || || || || Sbjct 29512 AGGACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGACCGTCC 29571 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||||||||| || ||||||||||| || || || || || || ||| Sbjct 29572 TCGAGCTGCTTGCCAGCAAAGATGAGGCGTTGCTGATCCGGCGGGATGCCCTCCTTGTCC 29631 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || || || || || ||||||| || || | || || || | || | ||| Sbjct 29632 TGGATCTTCGCCTTCACGTTGTCAATCGTGTCCGAGGACTCGACCTCCAACGTGATCGTC 29691 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || || || || || ||||| Sbjct 29692 TTGCCTGTGAGCGTCTTGACGAAGATTTGCAT 29723 Score = 93.3 bits (102), Expect = 1e-13 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 140548 CTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGA 140607 |||| || || || ||||| || | || || ||||||||||| || || ||||| |||| Sbjct 30414 CTTTCTGGATGTTGTAATCCGAGAGGGTGCGACCATCTTCAAGCTGCTTGCCAGCGAAGA 30473 Query 140608 TTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTAT 140667 | || || || || ||||| || || || || || || || || || || || ||||| | Sbjct 30474 TGAGGCGCTGTTGGTCAGGCGGGATCCCCTCCTTGTCTTGGATCTTGGCCTTGACATTGT 30533 Query 140668 CAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAA 140727 | || | || || | || || ||||| || | ||||| || || | || || || | Sbjct 30534 CGATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTGACGA 30593 Query 140728 AAATCTGCATT 140738 | || |||||| Sbjct 30594 AGATTTGCATT 30604 >seq20985 Length=2931 Score = 102 bits (112), Expect = 2e-16 Identities = 148/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| |||||||| ||||| || || || || || || || || || || ||||| | Sbjct 2095 CAAG-TGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTACGACCGTCTTCGA 2153 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 | || || |||||||| || || || ||||| || ||||| || || || || ||||||| Sbjct 2154 GCTGCTTGCCAGCAAAAATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGAA 2213 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 |||| || || || || || |||| || | || || || || || | ||||| | Sbjct 2214 TTTTTGCCTTGACGTTGTCGATCGTGTCGCTAGACTCGACCTCCAGAGTGATGGTCTTGC 2273 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || || || || || |||||||| Sbjct 2274 CAGTGAGGGTCTTGACGAAGATCTGCAT 2301 >seq2061 Length=13982 Score = 102 bits (112), Expect = 2e-16 Identities = 191/276 (69%), Gaps = 6/276 (2%) Strand=Plus/Plus Query 349618 TACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCAT 349677 || ||| || || || || || || | |||||| ||||| || || ||||| ||| Sbjct 7246 TAGTGTTCCCGCTTACTTCAACGACTCGCAGCGTCTGGCAACCAAGGACGCTGGTGCCAT 7305 Query 349678 TGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGG 349737 ||| || | ||||||| | || || || || |||||||| ||||| ||||||||||| Sbjct 7306 TGCTGGTCTTGATGTTCTCCGTATCATCAACGAGCCCACTGCCGCAGCCATTGCATATGG 7365 Query 349738 GCTTGAT--AAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGT 349795 || ||| ||| | || || || || | || ||||| || | ||||| || Sbjct 7366 TCTCGATCGCCAATCCAAGGCC--GAGAAGAACGTCCTGATTTTCGACCTTGGTGGAGGA 7423 Query 349796 ACTTTTGATGTATCACTACT-AACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGC 349854 || || ||||| || || || |||| | | || |||| | || ||||| ||||| Sbjct 7424 ACCTTCGATGTCTCCCTGCTCAACA-TCAGCGGTGGTGTTTTCGCCGTCAAAGCTACTGC 7482 Query 349855 TGGTGATACACATCTTGGTGGAGAAGATTTTGATAA 349890 |||||||| ||||||||||| || || || || || Sbjct 7483 CGGTGATACCCATCTTGGTGGCGAGGACTTCGACAA 7518 >seq22975 Length=1108 Score = 91.5 bits (100), Expect = 4e-13 Identities = 190/281 (68%), Gaps = 9/281 (3%) Strand=Plus/Plus Query 349620 CTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTG 349679 |||||||||| || || || | | ||||| || || || || |||| ||| Sbjct 9 CTGTACCAGCGTACTTCAACAACTCGCAGCG-------ACCAAGGACGCGGGCACCATCT 61 Query 349680 CGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGC 349739 | || ||||| ||||| | || || || | ||||| ||||| ||||| || || || | Sbjct 62 CCGGCTTAAACGTTCTCCGTATCATCAACAAGCCCACCGCTGCTGCAATCGCCTACGGCC 121 Query 349740 TTGATAAAATGAGTGACCAA-GaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACT 349798 | | || | | || | | || ||| | || || || ||| | ||||| || || Sbjct 122 TCAACAAGAAG-GTCAGCGGCGAGCGCAATGTCCTCATCTTCGATCTTGGTGGAGGAACC 180 Query 349799 TTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGT 349858 | ||||| || || || || | || ||||| || || || || || || ||||| || Sbjct 181 CTCGATGTCTCCCTGCTCACGATCGAGGAGGGTATCTTCGAGGTCAAGGCGACTGCCGGA 240 Query 349859 GATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGT 349899 || || |||||||| || || || || || ||||||||||| Sbjct 241 GACACCCATCTTGGCGGTGAGGACTTCGACAATCGTCTCGT 281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1514756231704980