Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycena_20chlorophos_20[genbank_20GCA_5F001612595.1_202016-04-02] 25,660 sequences; 43,602,020 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq20985 111 1e-19 seq11362 86.0 5e-12 >seq20985 Length=2931 Score = 111 bits (122), Expect = 1e-19 Identities = 151/211 (72%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || || |||||| | || ||||| || || || | | Sbjct 2301 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTCTGGAGGTCGAGTCTAGC 2242 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | ||||| ||||||||| ||||| || ||||| || || || || Sbjct 2241 GACACGATCGACAACGTCAAGGCAAAAATTCAGGACAAGGAGGGCATCCCTCCGGACCAG 2182 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | || ||||| || | |||||| || ||| | ||| |||||| Sbjct 2181 CAGCGCCTGATTTTTGCTGGCAAGCAGCTCGAAGACGGTCGTACCTTGAGCGACTACAAC 2122 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTT 27198 || || ||||||||||| | || ||||||| Sbjct 2121 ATCCAGAAGGAGTCGACTCTTCACTTGGTTT 2091 >seq11362 Length=37670 Score = 86.0 bits (94), Expect = 5e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 27043 CGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCG 27102 |||| ||| ||||||| | |||||| || || || |||||||| || || || || | Sbjct 29945 CGTCGGACACGATTGACAACGTCAAAGCCAAGATCCAGGACAAAGAGGGAATCCCGCCTG 29886 Query 27103 ATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATT 27162 |||| ||||| | || | ||| ||||||||| | || || | || | || || | Sbjct 29885 ATCAGCAGCGCCTTATCTTCGCGGGCAAACAACTTGAGGATGGACGTACTCTGTCGGACT 29826 Query 27163 ACAACATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 |||||||||| |||||||| ||| | || ||||| Sbjct 29825 ACAACATTCAGAAGGAGTCCACCCTGCACCTGGTT 29791 Score = 84.2 bits (92), Expect = 2e-11 Identities = 134/191 (70%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || |||| |||||| | || || ||||| || || | || Sbjct 30603 ATGCAAATCTTCGTCAAGACCTTGACTGGCAAGACCATCACCCTTGAGGTCGAGTCCTCG 30544 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || |||||||| || || || || || || ||| Sbjct 30543 GACACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAGGGGATCCCGCCTGACCAA 30484 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||| ||||| || | ||||| || ||| | || ||||||||| Sbjct 30483 CAGCGCCTCATCTTCGCTGGCAAGCAGCTTGAAGATGGTCGCACCCTCTCGGATTACAAC 30424 Query 27168 ATTCA-AAAGG 27177 || || ||||| Sbjct 30423 ATCCAGAAAGG 30413 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || || || |||||| | || || | || || || | || Sbjct 29723 ATGCAAATCTTCGTCAAGACGCTCACAGGCAAGACGATCACGTTGGAGGTCGAGTCCTCG 29664 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| ||||||| | || || || || || ||||| || ||||| || || ||||| Sbjct 29663 GACACGATTGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGATCAG 29604 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || | || | || ||||| || | || ||| || || | || || |||||| Sbjct 29603 CAACGCCTCATCTTTGCTGGCAAGCAGCTCGAGGACGGTCGCACGCTCTCGGACTACAAC 29544 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 || || ||||||||||| | || |||| ||||| | || || ||| Sbjct 29543 ATCCAGAAGGAGTCGACGCTCCACCTGGTCCTGCGTCTCCGTGGCGGC 29496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434778899923200