Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycena_20chlorophos_20[genbank_20GCA_5F001612595.1_202016-04-02] 25,660 sequences; 43,602,020 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq20985 129 1e-24 seq11362 127 5e-24 >seq20985 Length=2931 Score = 129 bits (142), Expect = 1e-24 Identities = 160/214 (75%), Gaps = 9/214 (4%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 || || ||||| || || ||||| || || || ||||| || ||||| || ||| Sbjct 2298 CAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTCTGGAGGTCGAGTCTAGC--- 2242 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||| ||||| |||||||| ||| ||||||||||| || || ||||||||||||||| Sbjct 2241 GACACGATCGACAACGTCAAGGCAAAAATTCAGGACAAGGAGGGCATCCCTCCGGACCAG 2182 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAA 178099 || || || || || || || || ||||||||||| || | || |||| ||| || || Sbjct 2181 CAGCGCCTGATTTTTGCTGGCAAGCAGCTCGAAGACGGTCGTAC-CTTGAGCGACTACAA 2123 Query 178100 CGTCCAAAAAGAATCAACACTGCATCTTGTTTTG 178133 | |||| || || || || || || |||| |||| Sbjct 2122 CATCCAGAAGGAGTCGACTCTTCA-CTTGGTTTG 2090 Score = 113 bits (124), Expect = 1e-19 Identities = 103/130 (79%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||| ||||| |||||||| ||||| |||||||| || |||||||| ||||||||| Sbjct 2568 GACACGATCGACAACGTCAAGGCGAAGATCCAGGACAAGGAGGGAATCCCGCCGGACCAG 2509 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || ||||| ||||| ||||| |||||||| || || | |||||| | || || ||| Sbjct 2508 CAGCGCCTTATTTTCGCTGGAAAGCAGCTCGAGGACGGTCGCACTCTTTCTGACTACAAC 2449 Query 178101 GTCCAAAAAG 178110 | || |||| Sbjct 2448 ATTCAGAAAG 2439 >seq11362 Length=37670 Score = 127 bits (140), Expect = 5e-24 Identities = 154/207 (74%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || | || || || || |||||||| ||||| || || ||| Sbjct 30323 CAGATCTTTGTCAAGACGTTGACTGGCAAGACCATCACCCTTGAGGTCGAGTCTTCGGAC 30264 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| |||||||||||||| || || || || || ||||| || Sbjct 30263 ACCATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCGCCCGACCAACAG 30204 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || |||||||||||||| || |||||||| ||||| | || |||| ||| || ||| | Sbjct 30203 CGCCTTATCTTCGCCGGCAAGCAGCTCGAGGATGGTCGCAC-CTTGAGCGACTACAACAT 30145 Query 178103 CCAAAAAGAATCAACACTGCATCTTGT 178129 ||| || || || || || || || || Sbjct 30144 CCAGAAGGAGTCCACTCTCCACCTGGT 30118 Score = 125 bits (138), Expect = 2e-23 Identities = 140/187 (75%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || | || || || || |||||||| ||||| || ||| ||| Sbjct 30600 CAAATCTTCGTCAAGACCTTGACTGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGAC 30541 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| || ||||| || || ||||| || ||||| || Sbjct 30540 ACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAGGGGATCCCGCCTGACCAACAG 30481 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || ||||| |||||||| | || || | ||||| ||| || Sbjct 30480 CGCCTCATCTTCGCTGGCAAGCAGCTTGAAGATGGTCGCACCCTCTCGGATTACAACATC 30421 Query 178104 CAAAAAG 178110 || |||| Sbjct 30420 CAGAAAG 30414 Score = 118 bits (130), Expect = 3e-21 Identities = 118/153 (77%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 177978 TCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGAC 178037 || ||||| || || ||||||||| ||||| ||||||||||| |||||||| || || Sbjct 29943 TCGGACACGATTGACAACGTCAAAGCCAAGATCCAGGACAAAGAGGGAATCCCGCCTGAT 29884 Query 178038 CAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTAT 178097 ||||| || ||||||||||| || ||||| || || |||||| | ||||| | || || Sbjct 29883 CAGCAGCGCCTTATCTTCGCGGGCAAACAACTTGAGGATGGACGTACTCTGTCGGACTAC 29824 Query 178098 AACGTCCAAAAAGAATCAACACTGCATCTTGTT 178130 ||| | || || || || || ||||| || ||| Sbjct 29823 AACATTCAGAAGGAGTCCACCCTGCACCTGGTT 29791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203335450798040